ggKbase home page

L3_079_029G1_scaffold_374

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_029G1_scaffold_374_1
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


3..707
DNA (705bp) protein (235aa)
30S ribosomal protein S2 n=5 Tax=Bacteroides RepID=C3QZ83_9BACE
SSU ribosomal protein S2P
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_079_029G1_scaffold_374_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

830..1822
DNA (993bp) protein (331aa)
Elongation factor Ts n=11 Tax=Bacteroides RepID=D6D0R3_9BACE
translation elongation factor Ts (EF-Ts)
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_079_029G1_scaffold_374_3
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2027..2536)
DNA (510bp) protein (170aa)
Protein disulfide isomerase n=1 Tax=Bacteroides sp. D22 RepID=D7IZP7_9BACE
Protein disulfide isomerase {ECO:0000313|EMBL:EFI15050.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Peroxiredoxin
L3_079_029G1_scaffold_374_4
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2573..2923)
DNA (351bp) protein (117aa)
Putative translation initiation factor SUI1 n=4 Tax=Bacteroides RepID=D0TU98_9BACE
Putative translation initiation factor SUI1 {ECO:0000313|EMBL:EEZ02832.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
translation initiation factor 1 (eIF-1/SUI1)
L3_079_029G1_scaffold_374_5
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3089..3739
DNA (651bp) protein (217aa)
Redox-sensing transcriptional repressor Rex n=11 Tax=Bacteroides RepID=D6D0R6_9BACE
AT-rich DNA-binding protein
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L3_079_029G1_scaffold_374_6
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3739..4353
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9V060_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY88428.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
L3_079_029G1_scaffold_374_7
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4392..4874
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=9 Tax=Bacteroides RepID=D6D0R8_9BACE
L3_079_029G1_scaffold_374_8
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4893..5900
DNA (1008bp) protein (336aa)
Phosphohydrolase, Icc family n=1 Tax=Bacteroides sp. D22 RepID=D7IZQ2_9BACE
Phosphohydrolase, Icc family {ECO:0000313|EMBL:EFI15055.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Predicted phosphohydrolases
L3_079_029G1_scaffold_374_9
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5890..6753)
DNA (864bp) protein (288aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C3QH81_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI15056.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L3_079_029G1_scaffold_374_10
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6864..7949
DNA (1086bp) protein (362aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Bacteroides sp. D22 RepID=D7IZQ4_9BACE
L3_079_029G1_scaffold_374_11
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7974..9329
DNA (1356bp) protein (452aa)
Exported serine protease, subtilase family n=1 Tax=Bacteroides sp. D22 RepID=D7IZQ5_9BACE
Exported serine protease, subtilase family {ECO:0000313|EMBL:EFI15058.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Subtilisin-like serine proteases
L3_079_029G1_scaffold_374_12
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9342..10574
DNA (1233bp) protein (411aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Bacteroides sp. D22 RepID=D7IZQ6_9BACE
L3_079_029G1_scaffold_374_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10635..10844
DNA (210bp) protein (70aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00198686};; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Hydrolase n=5 Tax=Bacteroides RepID=A7LTG6_BACOV
hypothetical protein
L3_079_029G1_scaffold_374_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10895..11914
DNA (1020bp) protein (340aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=4 Tax=Bacteroides RepID=A7LTG7_BACOV
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EIY55391.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_079_029G1_scaffold_374_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11960..12577
DNA (618bp) protein (206aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9AM54_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF53102.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Predicted integral membrane protein
L3_079_029G1_scaffold_374_16
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12690..13448
DNA (759bp) protein (253aa)
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
tRNA (guanine-N(7)-)-methyltransferase n=4 Tax=Bacteroides RepID=D6D0S6_9BACE
L3_079_029G1_scaffold_374_17
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13543..14643
DNA (1101bp) protein (367aa)
ATPases involved in chromosome partitioning n=10 Tax=Bacteroides RepID=D6D0S7_9BACE
ATPases involved in chromosome partitioning
Uncharacterized protein {ECO:0000313|EMBL:EIY88439.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L3_079_029G1_scaffold_374_18
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14975..16888)
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9AL95_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY88440.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Thiol-disulfide isomerase and thioredoxins
L3_079_029G1_scaffold_374_19
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16963..17088
DNA (126bp) protein (42aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM07499.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
L3_079_029G1_scaffold_374_20
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17080..18897)
DNA (1818bp) protein (606aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. D22 RepID=D7IZR3_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI15066.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
outer membrane transport energization protein TonB (TC 2.C.1.1.1)
L3_079_029G1_scaffold_374_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18916..19281)
DNA (366bp) protein (122aa)
Transcriptional regulator, BlaI/MecI/CopY family n=13 Tax=Bacteroides RepID=C3QH92_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN02451.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
transcriptional regulator
L3_079_029G1_scaffold_374_22
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19679..20248
DNA (570bp) protein (190aa)
Outer membrane insertion signal domain protein n=13 Tax=Bacteroides RepID=A7LTH7_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFI36846.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_079_029G1_scaffold_374_23
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20396..21655)
DNA (1260bp) protein (420aa)
ABC-2 type transporter n=7 Tax=Bacteroides RepID=A7LTH9_BACOV
Putative transporter {ECO:0000313|EMBL:EFI36847.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
ABC-type multidrug transport system, permease component
L3_079_029G1_scaffold_374_24
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21656..22699)
DNA (1044bp) protein (348aa)
ABC-2 type transporter n=4 Tax=Bacteroides RepID=C3QH95_9BACE
ABC-2 type transporter {ECO:0000313|EMBL:EEO51329.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
ABC-2 type transporter.
L3_079_029G1_scaffold_374_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22840..23832)
DNA (993bp) protein (331aa)
HlyD family secretion protein n=5 Tax=Bacteroides RepID=D7IZR8_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EXY30985.1}; TaxID=1339284 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T10.;"
Multidrug resistance efflux pump
L3_079_029G1_scaffold_374_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23939..25402)
DNA (1464bp) protein (488aa)
Outer membrane efflux protein n=3 Tax=Bacteroides RepID=D4W9R3_BACOV
Outer membrane efflux protein {ECO:0000313|EMBL:EFF54707.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Outer membrane protein
L3_079_029G1_scaffold_374_27
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25672..26613)
DNA (942bp) protein (314aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Malate dehydrogenase n=17 Tax=Bacteroides RepID=D6D0T6_9BACE
L3_079_029G1_scaffold_374_28
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26737..26940
DNA (204bp) protein (68aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=G1UKQ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB59269.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_079_029G1_scaffold_374_29
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26989..27081
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D1 RepID=G1UKR0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX26174.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_079_029G1_scaffold_374_30
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27499..28371
DNA (873bp) protein (291aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9ALA5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY88450.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
Displaying items 1-30 of 40 in total

View Taxonomy