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L3_079_029G1_scaffold_426

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_029G1_scaffold_426_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

368..1999
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AA88_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88252.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_029G1_scaffold_426_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2012..4153
DNA (2142bp) protein (714aa)
F5/8 type C domain protein n=2 Tax=Parabacteroides merdae RepID=A7AA89_9PORP
F5/8 type C domain protein {ECO:0000313|EMBL:EDN88253.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
alpha-1,3/4-fucosidase
L3_079_029G1_scaffold_426_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4303..6645)
DNA (2343bp) protein (781aa)
Glycosyl hydrolase family 35 n=2 Tax=Parabacteroides merdae RepID=A7AA90_9PORP
Glycosyl hydrolase family 35 {ECO:0000313|EMBL:EDN88254.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative glycosyl hydrolase
L3_079_029G1_scaffold_426_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6651..8936)
DNA (2286bp) protein (762aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XBJ7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13736.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_029G1_scaffold_426_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8994..9368)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y5N6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13737.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative beta-glucuronidase
L3_079_029G1_scaffold_426_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9506..11080)
DNA (1575bp) protein (525aa)
Arylsulfatase n=2 Tax=Parabacteroides merdae RepID=A7AA93_9PORP
Arylsulfatase {ECO:0000313|EMBL:EDN88257.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
mucin-desulfating sulfatase
L3_079_029G1_scaffold_426_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11222..13534)
DNA (2313bp) protein (771aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZM81_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12621.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_079_029G1_scaffold_426_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13883..15244)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AA98_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88262.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_029G1_scaffold_426_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15220..15966)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YGA5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12622.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_079_029G1_scaffold_426_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16841..18502)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZMW0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13743.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_029G1_scaffold_426_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18487..19035)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQY4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88268.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_029G1_scaffold_426_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19046..20404)
DNA (1359bp) protein (453aa)
Hydrophobic domain protein n=4 Tax=Parabacteroides RepID=A7AAA5_9PORP
Hydrophobic domain protein {ECO:0000313|EMBL:CDD13744.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
integral membrane protein
L3_079_029G1_scaffold_426_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20659..22728
DNA (2070bp) protein (690aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWN4_9PORP
two-component sensor histidine kinase
L3_079_029G1_scaffold_426_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22781..24277)
DNA (1497bp) protein (499aa)
Polysaccharide biosynthesis protein n=3 Tax=Parabacteroides RepID=A7AAA8_9PORP
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDD13746.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
polysaccharide biosynthesis protein
L3_079_029G1_scaffold_426_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24324..25349)
DNA (1026bp) protein (342aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B696_9PORP
L3_079_029G1_scaffold_426_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25406..26014)
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=R6WQY8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13748.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_079_029G1_scaffold_426_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26104..27291)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AAB1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88275.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_029G1_scaffold_426_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27501..27686
DNA (186bp) protein (62aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AAB3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13750.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_079_029G1_scaffold_426_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27758..29434)
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B1W9_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDD13752.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_029G1_scaffold_426_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30022..30213
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AAC0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88284.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_079_029G1_scaffold_426_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30494..31708
DNA (1215bp) protein (405aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A4W2_9PORP
ROK family protein {ECO:0000313|EMBL:CDD14831.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
xylose repressor
L3_079_029G1_scaffold_426_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31843..32760
DNA (918bp) protein (306aa)
Dihydrodipicolinate synthetase family n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AAC3_9PORP
Dihydrodipicolinate synthetase family {ECO:0000313|EMBL:EDN88287.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
N-acetylneuraminate lyase
L3_079_029G1_scaffold_426_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32774..33976
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B1X3_9PORP
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:CDD14829.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
renin-binding protein-like protein
L3_079_029G1_scaffold_426_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33963..35213
DNA (1251bp) protein (417aa)
Transporter, major facilitator family protein n=2 Tax=Parabacteroides RepID=A7AAC5_9PORP
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDN88289.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
major facilitator family transporter
L3_079_029G1_scaffold_426_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35308..36927
DNA (1620bp) protein (540aa)
BNR/Asp-box repeat protein n=2 Tax=Parabacteroides merdae RepID=A7AAC6_9PORP
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EDN88290.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
sialidase
L3_079_029G1_scaffold_426_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36934..38943
DNA (2010bp) protein (670aa)
Glycosyl hydrolase family 20 catalytic domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZS7_9PORP
Glycosyl hydrolase family 20 catalytic domain protein {ECO:0000313|EMBL:CDD14825.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
beta-N-acetylhexosaminidase
L3_079_029G1_scaffold_426_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38948..42115
DNA (3168bp) protein (1056aa)
mutarotase (EC:3.1.1.53)
Cyclically-permuted mutarotase n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6C193_9PORP
Cyclically-permuted mutarotase family protein {ECO:0000313|EMBL:CDD14824.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_079_029G1_scaffold_426_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42117..42716)
DNA (600bp) protein (200aa)
TIGR00730 family protein n=3 Tax=Parabacteroides merdae RepID=A7AAC9_9PORP
TIGR00730 family protein {ECO:0000313|EMBL:EDN88293.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
lysine decarboxylase
L3_079_029G1_scaffold_426_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42804..43547)
DNA (744bp) protein (248aa)
TIGR02757 family protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZAG4_9PORP
TIGR02757 family protein {ECO:0000313|EMBL:EKN12639.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_079_029G1_scaffold_426_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43551..44258)
DNA (708bp) protein (236aa)
DNA alkylation repair enzyme n=2 Tax=Parabacteroides merdae RepID=A7AAD1_9PORP
DNA alkylation repair enzyme {ECO:0000313|EMBL:EDN88295.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
Displaying items 1-30 of 46 in total

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