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L3_079_029G1_scaffold_474

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_029G1_scaffold_474_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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380..1849
DNA (1470bp) protein (490aa)
Outer membrane efflux protein n=3 Tax=Parabacteroides merdae RepID=A7ADY7_9PORP
Outer membrane efflux protein {ECO:0000313|EMBL:EDN87279.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
membrane protein
L3_079_029G1_scaffold_474_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1890..3140
DNA (1251bp) protein (417aa)
Efflux transporter RND family MFP subunit n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y0H6_9PORP
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD11982.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_029G1_scaffold_474_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3151..5556
DNA (2406bp) protein (802aa)
Efflux ABC transporter permease protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WLH2_9PORP
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD11983.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
efflux ABC transporter permease
L3_079_029G1_scaffold_474_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5579..7903
DNA (2325bp) protein (775aa)
Efflux ABC transporter permease protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYJ8_9PORP
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD11984.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative ABc transport system, membrane protein
L3_079_029G1_scaffold_474_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7944..10334
DNA (2391bp) protein (797aa)
Efflux ABC transporter permease protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WRH3_9PORP
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD11985.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_029G1_scaffold_474_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10373..12736
DNA (2364bp) protein (788aa)
Efflux ABC transporter permease protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X6U4_9PORP
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD11986.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
multidrug ABC transporter substrate-binding protein
L3_079_029G1_scaffold_474_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12911..13963
DNA (1053bp) protein (351aa)
Antioxidant, AhpC/TSA family n=3 Tax=Parabacteroides RepID=A7ADZ3_9PORP
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDN87285.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative thiol:disulfide oxidoreductase
L3_079_029G1_scaffold_474_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13970..14623
DNA (654bp) protein (218aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7ADZ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11988.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_029G1_scaffold_474_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14729..15235
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZCV8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11989.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_079_029G1_scaffold_474_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15237..17375)
DNA (2139bp) protein (713aa)
Peptidase S9A/B/C family catalytic domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X6V1_9PORP
Peptidase S9A/B/C family catalytic domain protein {ECO:0000313|EMBL:CDD11991.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
peptidase s9b dipeptidylpeptidase IV domain-containing protein
L3_079_029G1_scaffold_474_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17410..18183)
DNA (774bp) protein (258aa)
Hydrolase NUDIX family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYP4_9PORP
Hydrolase NUDIX family {ECO:0000313|EMBL:CDD11999.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
NADH pyrophosphatase
L3_079_029G1_scaffold_474_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18336..18569)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZTG0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12001.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_079_029G1_scaffold_474_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18642..19316
DNA (675bp) protein (225aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6BQ29_9PORP
Putative bacteriocin export ABC transporter lactococcin 972 group {ECO:0000313|EMBL:CDD12003.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative ABC transporter ATP-binding protein
L3_079_029G1_scaffold_474_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19456..20601
DNA (1146bp) protein (382aa)
Antioxidant, AhpC/TSA family n=2 Tax=Parabacteroides merdae RepID=A7AE08_9PORP
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDN87300.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
alkyl hydroperoxide reductase
L3_079_029G1_scaffold_474_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20856..21875)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X6Y7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12006.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
acyltransferase
L3_079_029G1_scaffold_474_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21975..24659
DNA (2685bp) protein (895aa)
Peptidase, S9A/B/C family, catalytic domain protein n=2 Tax=Parabacteroides merdae RepID=A7AE10_9PORP
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EDN87302.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
acylaminoacyl-peptidase
L3_079_029G1_scaffold_474_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24656..25672)
DNA (1017bp) protein (339aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Parabacteroides RepID=R6WLL7_9PORP
two-component system sensor histidine kinase
L3_079_029G1_scaffold_474_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25828..27048
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYQ7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12009.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
Displaying 18 items

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