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L3_079_062G1_scaffold_7

Search features with annotation key words

Displaying items 1-30 of 230 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_7_1
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1079..1819
DNA (741bp) protein (247aa)
Uncharacterized conserved protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N7R7_SLAHD
Uncharacterized protein {ECO:0000313|EMBL:KFI83657.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hypothetical protein
L3_079_062G1_scaffold_7_2
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2006..3160
DNA (1155bp) protein (385aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1SBD4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI61044.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
hypothetical protein
L3_079_062G1_scaffold_7_3
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3196..4620
DNA (1425bp) protein (475aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CEM7_BIFBI
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase
L3_079_062G1_scaffold_7_4
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4729..5958)
DNA (1230bp) protein (410aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Acetate kinase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV80_9BIFI
ack; Acetate kinase
L3_079_062G1_scaffold_7_5
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6150..7817)
DNA (1668bp) protein (556aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:KFI87672.1}; EC=2.3.1.8 {ECO:0000313|EMBL:KFI87672.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Phosphate acetyltransferase n=2 Tax=Bifidobacterium RepID=C0BSZ5_9BIFI
phosphate acetyltransferase
L3_079_062G1_scaffold_7_6
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8026..10503)
DNA (2478bp) protein (826aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Probable phosphoketolase n=3 Tax=Bifidobacterium RepID=Q6R2Q5_9BIFI
fructose-6-phosphate phosphoketolase
L3_079_062G1_scaffold_7_7
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10950..12512
DNA (1563bp) protein (521aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FFJ4_9BIFI
L3_079_062G1_scaffold_7_8
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12780..14585
DNA (1806bp) protein (602aa)
Putative uncharacterized protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N0U5_SLAHD
Uncharacterized protein {ECO:0000313|EMBL:KFI61498.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
hypothetical protein
L3_079_062G1_scaffold_7_9
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14872..15909
DNA (1038bp) protein (346aa)
Phosphate transport protein n=4 Tax=Bifidobacterium RepID=B7GSD4_BIFLS
Phosphate transport regulator {ECO:0000313|EMBL:KFI61499.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
phosphate transporter
L3_079_062G1_scaffold_7_10
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15928..16551
DNA (624bp) protein (208aa)
Uncharacterized protein n=7 Tax=Bifidobacterium bifidum RepID=E4V972_BIFBI
Phosphate transport regulator {ECO:0000313|EMBL:KFI86490.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
putative pit accessory protein
L3_079_062G1_scaffold_7_11
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16554..17195)
DNA (642bp) protein (214aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSD2_BIFLS
DNA-binding response regulator {ECO:0000313|EMBL:KFI61500.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
two-component response regulator
L3_079_062G1_scaffold_7_12
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17192..18403)
DNA (1212bp) protein (404aa)
Histidine kinase sensor {ECO:0000313|EMBL:KFI86492.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KFI86492.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
histidine kinase sensor (EC:2.7.13.3)
Histidine kinase n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V974_BIFBI
L3_079_062G1_scaffold_7_13
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18543..19493
DNA (951bp) protein (317aa)
Multidrug ABC transporter permease {ECO:0000313|EMBL:KFI61502.1}; EC=3.6.3.25 {ECO:0000313|EMBL:KFI61502.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
ABC transporter related n=2 Tax=Bifidobacterium RepID=B7GSD0_BIFLS
ABC transporter
L3_079_062G1_scaffold_7_14
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19506..20693
DNA (1188bp) protein (396aa)
Multidrug ABC transporter permease {ECO:0000313|EMBL:KFI61502.1}; EC=3.6.3.25 {ECO:0000313|EMBL:KFI61502.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTG5_9BIFI
ABC-type multidrug transport system permease component
L3_079_062G1_scaffold_7_15
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20680..21990
DNA (1311bp) protein (437aa)
ABC-2 type transporter n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8E9_BIFAD
ABC permease {ECO:0000313|EMBL:KFI61503.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
ABC transporter
L3_079_062G1_scaffold_7_16
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22120..23520
DNA (1401bp) protein (467aa)
MATE efflux family protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ARM4_BIFLN
MATE efflux family protein {ECO:0000313|EMBL:KFI61504.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Na driven multidrug efflux pump, MatE family
L3_079_062G1_scaffold_7_17
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23532..24878)
DNA (1347bp) protein (449aa)
uracil permease n=1 Tax=Bifidobacterium breve RepID=UPI000315F8B8
Xanthine/uracil permease family protein {ECO:0000313|EMBL:KFI84056.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
Xanthine permease
L3_079_062G1_scaffold_7_18
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24920..25498)
DNA (579bp) protein (193aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Xanthine phosphoribosyltransferase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A647_BIFAD
xanthine phosphoribosyltransferase
L3_079_062G1_scaffold_7_19
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25656..28361
DNA (2706bp) protein (902aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
pcrA; ATP-dependent DNA helicase PcrA (EC:3.1.11.5)
PcrA ATP-dependent DNA helicase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6HCG4_9BIFI
L3_079_062G1_scaffold_7_20
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


28702..29328
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=3 Tax=Bifidobacterium dentium RepID=D2QA23_BIFDB
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
rbsD; 30S ribosomal protein S4
L3_079_062G1_scaffold_7_21
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29411..29746)
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A655_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:KFI86501.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
hypothetical protein
L3_079_062G1_scaffold_7_22
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29988..30662
DNA (675bp) protein (225aa)
Phosphoglycerate mutase family protein n=2 Tax=Bifidobacterium RepID=C0BT06_9BIFI
Phosphoglycerate mutase {ECO:0000313|EMBL:KFI84062.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
fructose-2,6-bisphosphatase
L3_079_062G1_scaffold_7_23
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30752..31135
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BT07_9BIFI
Secreted protein {ECO:0000313|EMBL:KFI84063.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hypothetical protein
L3_079_062G1_scaffold_7_24
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31135..31371
DNA (237bp) protein (79aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DSE4_BIFLD
Uncharacterized protein {ECO:0000313|EMBL:KFI84064.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hypothetical protein
L3_079_062G1_scaffold_7_25
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


31487..34165
DNA (2679bp) protein (893aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=2 Tax=Bifidobacterium dentium RepID=E0Q6P9_9BIFI
L3_079_062G1_scaffold_7_26
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34176..34634
DNA (459bp) protein (153aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Putative Holliday junction resolvase n=4 Tax=Bifidobacterium bifidum RepID=E4P1B5_BIFBP
Holliday junction resolvase
L3_079_062G1_scaffold_7_27
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34648..35820
DNA (1173bp) protein (391aa)
Aminodeoxychorismate lyase n=4 Tax=Bifidobacterium dentium RepID=D2QA30_BIFDB
Aminodeoxychorismate lyase {ECO:0000313|EMBL:KFI61514.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
hypothetical protein
L3_079_062G1_scaffold_7_28
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35896..36360)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CEB5_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI61515.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
hypothetical protein
L3_079_062G1_scaffold_7_29
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36415..37608
DNA (1194bp) protein (398aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Chorismate synthase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A632_BIFAD
chorismate synthase
L3_079_062G1_scaffold_7_30
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37729..39354
DNA (1626bp) protein (542aa)
3-Dehydroquinate synthase {ECO:0000313|EMBL:KFI84070.1}; EC=2.7.1.71 {ECO:0000313|EMBL:KFI84070.1};; EC=4.2.3.4 {ECO:0000313|EMBL:KFI84070.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
aroB; 3-dehydroquinate synthase (EC:2.7.1.71)
3-dehydroquinate synthase n=2 Tax=Bifidobacterium dentium RepID=E1N967_9BIFI
Displaying items 1-30 of 230 in total

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