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L3_079_062G1_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_17_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(286..2220)
DNA (1935bp) protein (645aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWG1_BACV8
hypothetical protein
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR37767.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_062G1_scaffold_17_2
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2235..5306)
DNA (3072bp) protein (1024aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=C6Z2Y9_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EET15248.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_079_062G1_scaffold_17_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5348..7246)
DNA (1899bp) protein (633aa)
Glycosyl hydrolase, family 43 n=2 Tax=Bacteroides RepID=C6Z2Z0_9BACE
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:EOS03950.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
beta-xylosidase/alpha-L-arabinofuranosidase
L3_079_062G1_scaffold_17_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7434..8405)
DNA (972bp) protein (324aa)
Glycosyl hydrolase, family 43 n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8M8_BACVU
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EFG17691.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
beta-xylosidase/alpha-L-arabinofuranosidase
L3_079_062G1_scaffold_17_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8418..9539)
DNA (1122bp) protein (374aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Glycosyl hydrolase family 10 n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8M9_BACVU
beta-xylanase
L3_079_062G1_scaffold_17_6
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9579..11117)
DNA (1539bp) protein (513aa)
Glycoside/pentoside/hexuronide transporter n=7 Tax=Bacteroides RepID=C3R892_9BACE
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:EIY38723.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
sugar transporter
L3_079_062G1_scaffold_17_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11400..12191)
DNA (792bp) protein (264aa)
Glycosyl hydrolase family 16 n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8N1_BACVU
Glycosyl hydrolase family 16 {ECO:0000313|EMBL:EFG17694.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
beta-glycosidase
L3_079_062G1_scaffold_17_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12282..13670)
DNA (1389bp) protein (463aa)
Phosphoglucomutase/phosphomannomutase n=7 Tax=Bacteria RepID=A6KWH0_BACV8
phosphoglucomutase/phosphomannomutase
Phosphoglucosamine mutase {ECO:0000313|EMBL:EIY77739.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_062G1_scaffold_17_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13657..14301)
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6KWB7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS26375.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_079_062G1_scaffold_17_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14384..15424)
DNA (1041bp) protein (347aa)
DHHA1 domain protein n=4 Tax=Bacteria RepID=D4V8N4_BACVU
exopolyphosphatase-like protein
DHHA1 domain protein {ECO:0000313|EMBL:KDS54589.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_062G1_scaffold_17_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15474..17393)
DNA (1920bp) protein (640aa)
ComEC/Rec2-like protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8N5_BACVU
ComEC/Rec2-like protein {ECO:0000313|EMBL:EFG17698.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
competence protein
L3_079_062G1_scaffold_17_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17440..18093)
DNA (654bp) protein (218aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Ribulose-phosphate 3-epimerase n=6 Tax=Bacteroides RepID=A6KWC0_BACV8
ribulose-phosphate 3-epimerase
L3_079_062G1_scaffold_17_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18169..19464)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6KWC1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY77734.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_062G1_scaffold_17_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19467..20009)
DNA (543bp) protein (181aa)
Sigma-70 region 2 n=8 Tax=Bacteria RepID=D4V8N8_BACVU
RNA polymerase ECF-type sigma factor
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KDS54593.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_062G1_scaffold_17_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20209..20949
DNA (741bp) protein (247aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8N9_BACVU
NigD-like family protein {ECO:0000313|EMBL:KDS54594.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_079_062G1_scaffold_17_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21022..21996)
DNA (975bp) protein (325aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=2 Tax=Bacteroides RepID=D4V8P0_BACVU
L3_079_062G1_scaffold_17_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22010..23812)
DNA (1803bp) protein (601aa)
Chloride transporter, ClC family n=8 Tax=root RepID=C6Z306_9BACE
chloride channel protein
Putative chloride channel protein {ECO:0000313|EMBL:ABR37785.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_062G1_scaffold_17_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23821..24396)
DNA (576bp) protein (192aa)
Uncharacterized protein n=7 Tax=Bacteria RepID=A6KWH2_BACV8
translation factor
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EIY77729.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_062G1_scaffold_17_19
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24563..25726)
DNA (1164bp) protein (388aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
N-acetylglucosamine-6-phosphate deacetylase n=4 Tax=Bacteroides RepID=C6Z308_9BACE
N-acetylglucosamine-6-phosphate deacetylase
L3_079_062G1_scaffold_17_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25817..28993)
DNA (3177bp) protein (1059aa)
Putative membrane protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8P4_BACVU
Putative membrane protein {ECO:0000313|EMBL:EFG17707.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
drug efflux protein
L3_079_062G1_scaffold_17_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28990..30477)
DNA (1488bp) protein (496aa)
Outer membrane efflux protein n=6 Tax=Bacteroides RepID=C3R8B2_9BACE
outer membrane protein TolC
Putative outer membrane protein TolC {ECO:0000313|EMBL:ABR37789.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_062G1_scaffold_17_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30464..33544)
DNA (3081bp) protein (1027aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZQ95_BACVU
MMPL family protein {ECO:0000313|EMBL:KDS26390.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
cation efflux system
L3_079_062G1_scaffold_17_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33549..34616)
DNA (1068bp) protein (356aa)
Cation efflux system protein n=2 Tax=Bacteroides RepID=E5UXS9_9BACE
cation efflux system protein
Putative cation efflux system protein {ECO:0000313|EMBL:ABR37791.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_062G1_scaffold_17_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34669..36318)
DNA (1650bp) protein (550aa)
Putative membrane protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWH8_BACV8
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ABR37792.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_062G1_scaffold_17_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36321..37832)
DNA (1512bp) protein (504aa)
Conserved hypothetical exported protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWH9_BACV8
hypothetical protein
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:KDS54604.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_062G1_scaffold_17_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37834..38736)
DNA (903bp) protein (301aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Signal peptidase I n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWI0_BACV8
signal peptidase I
L3_079_062G1_scaffold_17_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38745..40649)
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWI1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS26465.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_079_062G1_scaffold_17_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40929..42023)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=3 Tax=root RepID=R9HJL3_BACVU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS03976.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_062G1_scaffold_17_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42112..42360)
DNA (249bp) protein (83aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=G1UMN9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS03977.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_079_062G1_scaffold_17_30
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42602..43387)
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=C3R8C1_9BACE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEB26816.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
Displaying items 1-30 of 122 in total

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