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L3_079_062G1_scaffold_23

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Displaying items 1-30 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_23_1
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(263..1645)
DNA (1383bp) protein (461aa)
Divergent AAA domain-containing protein n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5X599_9ACTN
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AEC01372.1}; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
L3_079_062G1_scaffold_23_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2243..4687
DNA (2445bp) protein (815aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6W7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40476.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_062G1_scaffold_23_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4668..5327
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHP3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36059.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_079_062G1_scaffold_23_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5324..7204
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6W5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40474.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_062G1_scaffold_23_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7201..8628
DNA (1428bp) protein (476aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EBA40473.1}; EC=2.4.-.- {ECO:0000313|EMBL:EBA40473.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6W4_9ACTN
Glycosyltransferase
L3_079_062G1_scaffold_23_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8632..10176
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4N2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36062.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_079_062G1_scaffold_23_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10166..11935
DNA (1770bp) protein (590aa)
CotH protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8R5_9ACTN
CotH protein {ECO:0000313|EMBL:CDA36063.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
CotH protein.
L3_079_062G1_scaffold_23_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11922..12212
DNA (291bp) protein (97aa)
VTC domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHP7_9ACTN
VTC domain protein {ECO:0000313|EMBL:CDA36064.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
VTC domain.
L3_079_062G1_scaffold_23_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12209..12712
DNA (504bp) protein (168aa)
VTC domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHP7_9ACTN
VTC domain protein {ECO:0000313|EMBL:CDA36064.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Hypothetical protein, contains VTC domain
L3_079_062G1_scaffold_23_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12716..13381
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB62_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36065.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_079_062G1_scaffold_23_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13612..14625
DNA (1014bp) protein (338aa)
Transcriptional regulator LacI family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNY3_9ACTN
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDA36066.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
LacI family transcriptional regulator
L3_079_062G1_scaffold_23_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14782..16209
DNA (1428bp) protein (476aa)
PTS system, glucose-like IIB component {ECO:0000313|EMBL:EBA40466.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EBA40466.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
PTS system glucose-like transporter subunit IIB (EC:2.7.1.69)
PTS system, glucose-like IIB component n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6V7_9ACTN
L3_079_062G1_scaffold_23_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16317..17858
DNA (1542bp) protein (514aa)
Glycosyl hydrolase family 32 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6V6_9ACTN
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:EBA40465.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glycosyl transferase family protein
L3_079_062G1_scaffold_23_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17954..18946
DNA (993bp) protein (331aa)
Cys/Met metabolism PLP-dependent enzyme n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6V5_9ACTN
Cys/Met metabolism PLP-dependent enzyme {ECO:0000313|EMBL:EBA40464.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Cys/Met metabolism pyridoxal-phosphate-dependent protein
L3_079_062G1_scaffold_23_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19080..19424)
DNA (345bp) protein (115aa)
Transcriptional regulator LysR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZEW8_9ACTN
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDA35109.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
N-terminal domain of molybdenum-binding protein
L3_079_062G1_scaffold_23_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19618..21129
DNA (1512bp) protein (504aa)
IMP dehydrogenase (EC:1.1.1.205)
Inosine 5-monophosphate dehydrogenase n=2 Tax=Collinsella RepID=A4E6V3_9ACTN
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:KGI73477.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_062G1_scaffold_23_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


21500..24076
DNA (2577bp) protein (859aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLI0_9ACTN
L3_079_062G1_scaffold_23_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24335..24829
DNA (495bp) protein (165aa)
Ribosome maturation factor RimP n=1 Tax=Collinsella sp. CAG:166 RepID=R6A1R4_9ACTN
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_079_062G1_scaffold_23_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24831..26078
DNA (1248bp) protein (416aa)
Transcription termination factor NusA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U9_9ACTN
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
NusA antitermination factor
L3_079_062G1_scaffold_23_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26170..28884
DNA (2715bp) protein (905aa)
Translation initiation factor IF-2 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U7_9ACTN
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
translation initiation factor IF-2
L3_079_062G1_scaffold_23_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28896..29306
DNA (411bp) protein (137aa)
Ribosome-binding factor A n=2 Tax=Collinsella RepID=A4E6U6_9ACTN
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ribosome-binding factor A
L3_079_062G1_scaffold_23_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29299..30342
DNA (1044bp) protein (348aa)
DHHA1 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73483.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
phosphoesterase RecJ domain-containing protein
L3_079_062G1_scaffold_23_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30388..31290
DNA (903bp) protein (301aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U4_9ACTN
L3_079_062G1_scaffold_23_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31287..32294
DNA (1008bp) protein (336aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
FMN adenylyltransferase; riboflavin kinase (EC:2.7.7.2 2.7.1.26)
Riboflavin biosynthesis protein RibF n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U3_9ACTN
L3_079_062G1_scaffold_23_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32287..34401
DNA (2115bp) protein (705aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Putative DNA primase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U2_9ACTN
DNA primase
L3_079_062G1_scaffold_23_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34497..35858
DNA (1362bp) protein (454aa)
RNA polymerase sigma factor SigA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6U1_9ACTN
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
RNA polymerase sigma-70 subunit RpoD
L3_079_062G1_scaffold_23_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36395..36751
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPV0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73417.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_062G1_scaffold_23_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36779..38440
DNA (1662bp) protein (554aa)
DAK2 domain fusion protein YloV n=2 Tax=Collinsella RepID=A4E6T8_9ACTN
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EBA40447.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
DAK2 domain fusion protein YloV
L3_079_062G1_scaffold_23_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38450..40627
DNA (2178bp) protein (726aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
Putative ATP-dependent DNA helicase RecG n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6T7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73419.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_062G1_scaffold_23_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

40624..41268
DNA (645bp) protein (215aa)
RNA methyltransferase, RsmD family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6T6_9ACTN
RsmD family RNA methyltransferase {ECO:0000313|EMBL:KGI73420.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
methyltransferase
Displaying items 1-30 of 143 in total

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