ggKbase home page

L3_079_062G1_scaffold_46

Search features with annotation key words

Displaying items 1-30 of 182 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_46_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(420..1652)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=Q650B6_BACFR
putative transmembrane spore maturation-like protein
Uncharacterized protein {ECO:0000313|EMBL:EKA86829.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_079_062G1_scaffold_46_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1759..2457
DNA (699bp) protein (233aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=E1WK02_BACF6
hypothetical protein
DNA alkylation repair enzyme family protein {ECO:0000313|EMBL:EXZ46658.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L3_079_062G1_scaffold_46_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2786..3814
DNA (1029bp) protein (343aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
Holliday junction ATP-dependent DNA helicase RuvB n=14 Tax=Bacteroides RepID=RUVB_BACFN
ruvB; putative holliday junction DNA helicase
L3_079_062G1_scaffold_46_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3843..5339
DNA (1497bp) protein (499aa)
Possible polysaccharide biosynthesis transmembrane protein n=8 Tax=Bacteroides RepID=E1WK04_BACF6
polysaccharide biosynthesis transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:EKA86826.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_079_062G1_scaffold_46_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5342..6709
DNA (1368bp) protein (456aa)
Hydrophobic domain protein n=12 Tax=Bacteroides RepID=D1JQF9_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE58399.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_079_062G1_scaffold_46_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6761..8938
DNA (2178bp) protein (726aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q650B1_BACFR
hypothetical protein
Peptidase S46 family protein {ECO:0000313|EMBL:EXY67342.1}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
L3_079_062G1_scaffold_46_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8988..9851)
DNA (864bp) protein (288aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=Q650B0_BACFR
putative transmembrane protein
EamA-like transporter family protein {ECO:0000313|EMBL:EXY76090.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
L3_079_062G1_scaffold_46_8
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10599..12542)
DNA (1944bp) protein (648aa)
ATP-dependent RNA helicase n=14 Tax=Bacteroides RepID=Q650A8_BACFR
DEAD/DEAH box helicase {ECO:0000313|EMBL:EEZ25677.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
putative RNA helicase dead-box protein
L3_079_062G1_scaffold_46_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12604..13659)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=E1WK10_BACF6
hypothetical protein
Dual specificity phosphatase, catalytic family protein {ECO:0000313|EMBL:EXZ55843.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_079_062G1_scaffold_46_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13845..14765)
DNA (921bp) protein (307aa)
Fructokinase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q650A6_BACFR
fructokinase
Fructokinase {ECO:0000313|EMBL:BAD46920.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_062G1_scaffold_46_11
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14753..15358)
DNA (606bp) protein (202aa)
KpsF/GutQ family sugar isomerase n=14 Tax=Bacteroides RepID=C6I2U4_9BACE
putative sugar isomerase SIS-domain protein
Putative sugar isomerase {ECO:0000313|EMBL:CDD38480.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_062G1_scaffold_46_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15358..15888)
DNA (531bp) protein (177aa)
Lysine decarboxylase n=7 Tax=Bacteroides RepID=Q650A4_BACFR
lysine decarboxylase
TIGR00730 family protein {ECO:0000313|EMBL:EIZ00092.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_079_062G1_scaffold_46_13
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15990..17237
DNA (1248bp) protein (416aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=C6I2U2_9BACE
putative zinc protease YmxG
Putative zinc protease YmxG {ECO:0000313|EMBL:CDD38478.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_062G1_scaffold_46_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17404..17754)
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9GU79_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EYE48254.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
hypothetical protein
L3_079_062G1_scaffold_46_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18003..18533
DNA (531bp) protein (177aa)
Possible acetyltransferase protein n=12 Tax=Bacteroides RepID=E1WK16_BACF6
acetyltransferase protein
Acetyltransferase family protein {ECO:0000313|EMBL:EXZ46674.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L3_079_062G1_scaffold_46_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18680..19888)
DNA (1209bp) protein (403aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
Mannonate dehydratase n=2 Tax=Bacteroides RepID=E1WK17_BACF6
uxuA; putative mannonate dehydratase
L3_079_062G1_scaffold_46_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19985..20797)
DNA (813bp) protein (271aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6I2T8_9BACE
uxuB; putative D-mannonate oxidoreductase
Short chain dehydrogenase family protein {ECO:0000313|EMBL:EXY72133.1}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
L3_079_062G1_scaffold_46_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20926..21570)
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HTL5_BACFG
WbqC-like family protein {ECO:0000313|EMBL:EYE58415.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
hypothetical protein
L3_079_062G1_scaffold_46_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21634..22569)
DNA (936bp) protein (312aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
Signal peptidase I n=14 Tax=Bacteroides RepID=Q64ZZ7_BACFR
putative exported signal peptidase I
L3_079_062G1_scaffold_46_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22577..24061)
DNA (1485bp) protein (495aa)
Signal peptidase I {ECO:0000313|EMBL:EXY67359.1}; EC=3.4.21.89 {ECO:0000313|EMBL:EXY67359.1};; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
Possible signal peptidase n=12 Tax=Bacteroides RepID=E1WK21_BACF6
possible signal peptidase
L3_079_062G1_scaffold_46_21
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24066..24794)
DNA (729bp) protein (243aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
Dihydrodipicolinate reductase n=13 Tax=Bacteroides RepID=Q64ZZ5_BACFR
putative dihydrodipicolinate reductase
L3_079_062G1_scaffold_46_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24890..26158
DNA (1269bp) protein (423aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HTL1_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ00102.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
hypothetical protein
L3_079_062G1_scaffold_46_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26250..26810
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JQH8_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXY92795.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_079_062G1_scaffold_46_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27004..27936)
DNA (933bp) protein (311aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
tRNA-dihydrouridine synthase n=4 Tax=Bacteroides RepID=E1WK25_BACF6
hypothetical protein
L3_079_062G1_scaffold_46_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27943..29163)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=C6I2T0_9BACE
outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:EXY42815.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
L3_079_062G1_scaffold_46_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29394..30035
DNA (642bp) protein (214aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q5LIU6_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ00106.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_079_062G1_scaffold_46_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30137..30907)
DNA (771bp) protein (257aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
UDP-N-acetylglucosamine acetyltransferase n=13 Tax=Bacteroides RepID=Q64ZY9_BACFR
putative acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
L3_079_062G1_scaffold_46_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30927..32318)
DNA (1392bp) protein (464aa)
Outer membrane protein oprM n=10 Tax=Bacteroides RepID=Q64ZY8_BACFR
putative outer membrane lipoprotein
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein {ECO:0000313|EMBL:EYB11551.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_079_062G1_scaffold_46_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32335..35538)
DNA (3204bp) protein (1068aa)
AcrB/AcrD family multidrug resistance protein n=14 Tax=Bacteroides RepID=Q64ZY7_BACFR
putative AcrB/AcrD family RND transport protein
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EIY53879.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_079_062G1_scaffold_46_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35742..36668)
DNA (927bp) protein (309aa)
AcrA/AcrE family multidrug resistance protein n=13 Tax=Bacteroides RepID=Q64ZY6_BACFR
putative AcrA/AcrE RND transport or HlyD secretion family protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EYE48272.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
Displaying items 1-30 of 182 in total

View Taxonomy