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L3_079_062G1_scaffold_47

Search features with annotation key words

Displaying items 1-30 of 237 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_47_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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217..765
DNA (549bp) protein (183aa)
RNA polymerase ECF-type sigma factor n=10 Tax=Bacteroides RepID=Q64RM9_BACFR
putative sigma factor
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKA85444.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_079_062G1_scaffold_47_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(784..2160)
DNA (1377bp) protein (459aa)
Outer membrane protein oprM n=9 Tax=Bacteroides RepID=Q64RM8_BACFR
putative puter membrane protein
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein {ECO:0000313|EMBL:EYB08893.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_079_062G1_scaffold_47_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2164..5343)
DNA (3180bp) protein (1060aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=9 Tax=Bacteroides RepID=C6I6J3_9BACE
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EIY90917.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
acrD; putative aminoglycoside efflux pump
L3_079_062G1_scaffold_47_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5404..6594)
DNA (1191bp) protein (397aa)
Efflux transporter, RND family, MFP subunit n=7 Tax=Bacteroides RepID=D1JT92_9BACE
putative acriflavine resistance protein E precursor
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EIY90918.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_079_062G1_scaffold_47_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6913..9123
DNA (2211bp) protein (737aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LVU7_9BACE
Patatin-like phospholipase family protein {ECO:0000313|EMBL:EYE43501.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
hypothetical protein
L3_079_062G1_scaffold_47_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9372..9641
DNA (270bp) protein (90aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=E1WSA7_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY90920.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_079_062G1_scaffold_47_7
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9644..10201
DNA (558bp) protein (186aa)
Acyltransferase family protein n=14 Tax=Bacteroides RepID=Q64RM3_BACFR
putative acyltransferase
Acyltransferase family protein {ECO:0000313|EMBL:CDD41897.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_062G1_scaffold_47_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10208..10978
DNA (771bp) protein (257aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8X5I2_BACFG
putative hydrolase
Uncharacterized protein {ECO:0000313|EMBL:EIY45337.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_079_062G1_scaffold_47_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11116..12282
DNA (1167bp) protein (389aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
N-acetylglucosamine-6-phosphate deacetylase n=13 Tax=Bacteroides RepID=E1WSB0_BACF6
putative N-acetylglucosamine-6-phosphate deacetylase
L3_079_062G1_scaffold_47_10
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12562..14553
DNA (1992bp) protein (664aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
Glucosamine-6-phosphate deaminase-like protein n=13 Tax=Bacteroides RepID=D1JT86_9BACE
putative glucosamine-6-phosphate deaminase
L3_079_062G1_scaffold_47_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14597..15370
DNA (774bp) protein (258aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6I6K1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY45340.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
hypothetical protein
L3_079_062G1_scaffold_47_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15472..18381
DNA (2910bp) protein (970aa)
Xanthan lyase n=3 Tax=Bacteroides RepID=Q64RL8_BACFR
hypothetical protein
N-acetylmuramoyl-L-alanine amidase family protein {ECO:0000313|EMBL:EXZ77430.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_079_062G1_scaffold_47_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18622..18744)
DNA (123bp) protein (41aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=D1JT81_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EYE46237.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_079_062G1_scaffold_47_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18834..19235
DNA (402bp) protein (134aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=Q64RL6_BACFR
Putative exported protein {ECO:0000313|EMBL:EXZ72387.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
hypothetical protein
L3_079_062G1_scaffold_47_15
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19488..19808
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q64RL4_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEZ25272.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_079_062G1_scaffold_47_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19805..20020
DNA (216bp) protein (72aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=E1WSB7_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAH08654.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
L3_079_062G1_scaffold_47_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20017..20361
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=E1WSB8_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD49869.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_062G1_scaffold_47_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20366..20842
DNA (477bp) protein (159aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=Q64RL1_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE46243.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_079_062G1_scaffold_47_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20868..22724
DNA (1857bp) protein (619aa)
UPF0313 protein BF9343_2876 n=7 Tax=Bacteroides RepID=Q5LB65_BACFN
putative Fe-S oxidoreductase
UPF0313 protein HMPREF1204_02102 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_079_062G1_scaffold_47_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22749..26126)
DNA (3378bp) protein (1126aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
Transcription-repair-coupling factor n=3 Tax=Bacteroides RepID=F7LVS6_9BACE
transcription-repair coupling factor
L3_079_062G1_scaffold_47_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26319..27071
DNA (753bp) protein (251aa)
Dolichol-phosphate mannosyltransferase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64RK8_BACFR
dolichol-phosphate mannosyltransferase
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:BAD49873.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_062G1_scaffold_47_22
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27075..28454
DNA (1380bp) protein (460aa)
Dihydroorotase n=10 Tax=Bacteroides RepID=Q64RK7_BACFR
putative allantoinase
Dihydroorotase {ECO:0000313|EMBL:CDD41799.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_062G1_scaffold_47_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28494..28793
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LB61_BACFN
hypothetical protein
Four helix bundle family protein {ECO:0000313|EMBL:EXZ93776.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
L3_079_062G1_scaffold_47_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28830..29768
DNA (939bp) protein (313aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=I3HLV3_BACFG
putative 5-methyltetrahydrofolate--homocysteine methyltransferase
Vitamin B12 dependent methionine synthase, activation domain protein {ECO:0000313|EMBL:EXZ93777.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
L3_079_062G1_scaffold_47_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29825..30745
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HLV4_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY90939.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
hypothetical protein
L3_079_062G1_scaffold_47_26
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30946..31833)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis CAG:47 RepID=R6ZLC2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD41791.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
hypothetical protein
L3_079_062G1_scaffold_47_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31882..32748)
DNA (867bp) protein (289aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=Q64RK1_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY90941.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_079_062G1_scaffold_47_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32781..33911)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=D1JT65_9BACE
putative lipoprotein
Fibronectin type III domain protein {ECO:0000313|EMBL:EXY40157.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
L3_079_062G1_scaffold_47_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34204..34632
DNA (429bp) protein (143aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q64RJ8_BACFR
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBW23461.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_062G1_scaffold_47_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34700..35182)
DNA (483bp) protein (161aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=E1WSW2_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ52646.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
Displaying items 1-30 of 237 in total

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