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L3_079_062G1_scaffold_59

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_59_1
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..813)
DNA (813bp) protein (271aa)
Chromosomal replication initiator protein DnaA n=2 Tax=Bifidobacterium RepID=C0BUB4_9BIFI
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
dnaA; dnaa
L3_079_062G1_scaffold_59_2
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1111..1245
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=6 Tax=Bifidobacterium longum RepID=D6DAZ7_BIFLN
LSU ribosomal protein L34P
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
L3_079_062G1_scaffold_59_3
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1942..2955
DNA (1014bp) protein (338aa)
Membrane protein insertase, YidC/Oxa1 family n=2 Tax=Bifidobacterium dentium RepID=E0Q9I7_9BIFI
Preprotein translocase subunit YidC {ECO:0000313|EMBL:KFI85689.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
yidC; preprotein translocase subunit YidC
L3_079_062G1_scaffold_59_4
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3074..3580
DNA (507bp) protein (169aa)
R3H domain protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XSH3_9BIFI
R3H domain protein {ECO:0000313|EMBL:KFI83151.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
R3H domain-containing protein
L3_079_062G1_scaffold_59_5
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3679..4365
DNA (687bp) protein (229aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Ribosomal RNA small subunit methyltransferase G n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) PF3_BIFLS">RepID=B7GPF3_BIFLS
gidB; 16S rRNA methyltransferase GidB
L3_079_062G1_scaffold_59_6
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4575..5534
DNA (960bp) protein (320aa)
parA; chromosome partitioning protein PrA (EC:1.18.6.1)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9J0_9BIFI
Chromosome partitioning protein PrA {ECO:0000313|EMBL:KFI85686.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
L3_079_062G1_scaffold_59_7
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5534..6733
DNA (1200bp) protein (400aa)
Chromosome partitioning protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GMH3_9BIFI
Stage 0 sporulation protein J {ECO:0000313|EMBL:KFI85685.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
parB2; Chromosome partitioning protein parB
L3_079_062G1_scaffold_59_8
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6834..7766)
DNA (933bp) protein (311aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
trxB2; trxB2 Thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=2 Tax=Bifidobacterium dentium RepID=E0Q9J2_9BIFI
L3_079_062G1_scaffold_59_9
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7842..8171)
DNA (330bp) protein (110aa)
MFS transporter n=1 Tax=Glaciibacter superstes RepID=UPI0003B6C53C
Major facilitator superfamily protein {ECO:0000313|EMBL:KFI60199.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
MFS transporter
L3_079_062G1_scaffold_59_10
unknown

Not on your lists

8264..8818
DNA (555bp) protein (185aa)

This feature has no annotations

L3_079_062G1_scaffold_59_11
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9024..12821)
DNA (3798bp) protein (1266aa)
Integral membrane protein MviN n=2 Tax=Bifidobacterium dentium RepID=E0Q9J4_9BIFI
Integral membrane protein MviN {ECO:0000313|EMBL:KFI85683.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
mviN; integral membrane protein MviN
L3_079_062G1_scaffold_59_12
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12818..14962)
DNA (2145bp) protein (715aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9J5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI60201.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
hypothetical protein
L3_079_062G1_scaffold_59_13
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14959..15612)
DNA (654bp) protein (218aa)
Phosphohydrolase {ECO:0000313|EMBL:KFI85681.1}; EC=3.6.1.55 {ECO:0000313|EMBL:KFI85681.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
phosphohydrolase (EC:3.6.1.13)
Hydrolase, NUDIX family n=2 Tax=Bifidobacterium RepID=C0BU95_9BIFI
L3_079_062G1_scaffold_59_14
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15738..17150
DNA (1413bp) protein (471aa)
PcnA tRNA nucleotidyltransferase {ECO:0000313|EMBL:KFI83142.1}; EC=2.7.7.72 {ECO:0000313|EMBL:KFI83142.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
tRNA adenylyltransferase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XS65_9BIFI
RNA nucleotidyltransferase
L3_079_062G1_scaffold_59_15
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17151..17792)
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S8N6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI60204.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
hypothetical protein
L3_079_062G1_scaffold_59_16
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17857..18759)
DNA (903bp) protein (301aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
spE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Bifidobacterium dentium RepID=E0Q9J9_9BIFI
L3_079_062G1_scaffold_59_17
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(18756..19637)
DNA (882bp) protein (294aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C975_BIFBA
Dimethyladenosine transferase
L3_079_062G1_scaffold_59_18
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19719..21149)
DNA (1431bp) protein (477aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APG0_BIFLN
G5 domain-containing protein {ECO:0000313|EMBL:KFI60207.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
hypothetical protein
L3_079_062G1_scaffold_59_19
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21713..22690)
DNA (978bp) protein (326aa)
DSBA oxidoreductase n=1 Tax=Bifidobacterium magnum RepID=UPI0003B6629E
DSBA oxidoreductase {ECO:0000313|EMBL:KFI85675.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
DSBA oxidoreductase
L3_079_062G1_scaffold_59_20
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22766..24733)
DNA (1968bp) protein (656aa)
Kinase domain protein {ECO:0000313|EMBL:KFI60209.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KFI60209.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
serine/threonine protein kinase (EC:2.7.11.17)
Kinase domain protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9B3_BIFLI
L3_079_062G1_scaffold_59_21
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25121..27991
DNA (2871bp) protein (957aa)
Putative beta-glucosidase {ECO:0000313|EMBL:KFI85673.1}; EC=3.2.1.21 {ECO:0000313|EMBL:KFI85673.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU85_9BIFI
beta-glucosidase
L3_079_062G1_scaffold_59_22
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28244..29050)
DNA (807bp) protein (269aa)
Kef-type K+ transport systems Hypothetical NAD-binding component n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DP43_BIFLD
Potassium channel protein {ECO:0000313|EMBL:KFI85672.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
kch; Kef-type K+ transport system NAD-binding protein
L3_079_062G1_scaffold_59_23
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29351..31735
DNA (2385bp) protein (795aa)
Glycosyl hydrolase family 3, N-terminal domain protein {ECO:0000313|EMBL:KFI83133.1}; EC=3.2.1.21 {ECO:0000313|EMBL:KFI83133.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
Glycosyl hydrolase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APG9_BIFLN
glycosyl hydrolase
L3_079_062G1_scaffold_59_24
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31728..32288
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P0W2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI60213.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
PTS system cellobiose-specific IIC component
L3_079_062G1_scaffold_59_25
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32426..33748)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NTW2_9BIFI
Two-component sensor histidine kinase {ECO:0000313|EMBL:KFI60214.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
histidine kinase
L3_079_062G1_scaffold_59_26
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33745..34461)
DNA (717bp) protein (239aa)
LytTr DNA-binding domain protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9I2_9BIFI
Two-component response regulator VirR {ECO:0000313|EMBL:KFI60215.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
virR; two-component response regulator VirR
L3_079_062G1_scaffold_59_27
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34610..35569)
DNA (960bp) protein (320aa)
PfkB family ribokinase {ECO:0000313|EMBL:KFI60216.1}; EC=2.7.1.15 {ECO:0000313|EMBL:KFI60216.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Sugar kinase in PfkB family n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3I3_BIFAA
rbsK; PfkB family sugar kinase
L3_079_062G1_scaffold_59_28
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35648..37054)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NQA7_9BIFI
Major facilitator family transporter {ECO:0000313|EMBL:KFI60217.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
MFS superfamily transporter
L3_079_062G1_scaffold_59_29
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37131..38087)
DNA (957bp) protein (319aa)
Inosine/uridine-preferring nucleoside hydrolase {ECO:0000313|EMBL:KFI83127.1}; EC=3.2.2.3 {ECO:0000313|EMBL:KFI83127.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
Inosine/uridine-preferring nucleoside hydrolase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GUC8_BIFLS
putative nucleoside hydrolase
L3_079_062G1_scaffold_59_30
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38711..39838
DNA (1128bp) protein (376aa)
ABC-type sugar transport system, ATPase component {ECO:0000313|EMBL:KFI83126.1}; EC=3.6.3.20 {ECO:0000313|EMBL:KFI83126.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
ATP binding protein of ABC transporter for sugars n=2 Tax=Bifidobacterium adolescentis RepID=A1A3U1_BIFAA
ATP binding protein of ABC transporter for sugars
Displaying items 1-30 of 91 in total

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