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L3_079_062G1_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_72_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..665
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9V6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34596.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G1_scaffold_72_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(795..1397)
DNA (603bp) protein (201aa)
cmpK; cytidylate kinase CmpK (EC:2.7.4.14)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34595.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G1_scaffold_72_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1462..2727)
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34594.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G1_scaffold_72_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2724..3209)
DNA (486bp) protein (162aa)
Sigma-70 region 2 n=2 Tax=Clostridiales RepID=G9YSX7_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO34593.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RNA polymerase sigma factor, sigma-70 family
L3_079_062G1_scaffold_72_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3481..4836
DNA (1356bp) protein (452aa)
gdhA; NADP-specific glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9V2_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G1_scaffold_72_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5236..5754)
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YSY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI64922.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_079_062G1_scaffold_72_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5867..6076
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YSY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34590.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
DNA-binding protein
L3_079_062G1_scaffold_72_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6680..8260
DNA (1581bp) protein (527aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34589.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G1_scaffold_72_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8433..9524
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9U8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34588.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
integrase family protein
L3_079_062G1_scaffold_72_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9643..10128
DNA (486bp) protein (162aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9U7_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO34587.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RNA polymerase sigma factor, sigma-70 family
L3_079_062G1_scaffold_72_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10121..11554
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34586.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G1_scaffold_72_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11599..12072)
DNA (474bp) protein (158aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridiales RepID=G9YSY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34585.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
N-acetyltransferase GCN5
L3_079_062G1_scaffold_72_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12106..13470)
DNA (1365bp) protein (455aa)
Citrate synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9U4_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
citrate synthase
L3_079_062G1_scaffold_72_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13632..14522)
DNA (891bp) protein (297aa)
CorA-like protein n=3 Tax=Clostridiales RepID=G9YSY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34583.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Mg2+ and Co2+ transporters
L3_079_062G1_scaffold_72_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14984..16063
DNA (1080bp) protein (360aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2ATG3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34582.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative transmembrane anchored protein
L3_079_062G1_scaffold_72_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16156..16428)
DNA (273bp) protein (91aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YSZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34581.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G1_scaffold_72_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16689..17162)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2ARD1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34580.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Hypothetical protein
L3_079_062G1_scaffold_72_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17276..17818)
DNA (543bp) protein (181aa)
Rubredoxin n=3 Tax=Clostridiales RepID=G9YUI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53755.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Rubrerythrin
L3_079_062G1_scaffold_72_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17953..18564)
DNA (612bp) protein (204aa)
Ribonuclease M5 n=2 Tax=Clostridiales RepID=H1C9T8_9FIRM
Putative ribonuclease M5 {ECO:0000313|EMBL:ERI62663.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_079_062G1_scaffold_72_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18566..18994)
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34577.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G1_scaffold_72_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18999..20036)
DNA (1038bp) protein (346aa)
holA; DNA polymerase III delta subunit (EC:2.7.7.7)
DNA polymerase III, delta subunit n=2 Tax=Clostridiales RepID=H1C9T6_9FIRM
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EHO34576.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G1_scaffold_72_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20048..22321)
DNA (2274bp) protein (758aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9T5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34575.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G1_scaffold_72_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22314..22532)
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9T4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53749.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative Xre family DNA-binding protein
L3_079_062G1_scaffold_72_24
unknown

Not on your lists

22814..23038
DNA (225bp) protein (75aa)

This feature has no annotations

L3_079_062G1_scaffold_72_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23307..23954
DNA (648bp) protein (216aa)
Transcriptional regulator, MerR family n=2 Tax=Clostridiales RepID=U2AZG3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34573.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative MerR family transcriptional regulator
L3_079_062G1_scaffold_72_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23935..24255
DNA (321bp) protein (107aa)
UPF0145 protein HMPREF0372_02378 n=2 Tax=Clostridiales RepID=G9YS72_9FIRM
UPF0145 protein HMPREF9460_03432 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_079_062G1_scaffold_72_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24291..25229
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9T1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34571.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G1_scaffold_72_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25360..27279
DNA (1920bp) protein (640aa)
C-terminal processing peptidase n=2 Tax=Clostridiales RepID=H1C9T0_9FIRM
C-terminal processing peptidase {ECO:0000313|EMBL:EHO34570.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
C-terminal processing peptidase
L3_079_062G1_scaffold_72_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27521..28315)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1C9S9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34778.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC-type uncharacterized transport system, ATPase component
L3_079_062G1_scaffold_72_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28308..29258)
DNA (951bp) protein (317aa)
Branched-chain amino acid ABC transporter, permease protein n=3 Tax=Clostridiales RepID=G9YS68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34777.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC-type uncharacterized transport system, permease component
Displaying items 1-30 of 106 in total

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