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L3_079_062G1_scaffold_86

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_86_1
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..393)
DNA (393bp) protein (131aa)
Chromosomal replication initiator protein DnaA n=16 Tax=Bifidobacterium RepID=DNAA_BIFLD
Chromosomal replication initiation protein {ECO:0000313|EMBL:KFI84561.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
chromosomal replication initiator protein DnaA
L3_079_062G1_scaffold_86_2
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

562..4116
DNA (3555bp) protein (1185aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
DNA polymerase III, alpha subunit n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV79_BIFLJ
DNA polymerase III subunit alpha
L3_079_062G1_scaffold_86_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4120..4758)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U2ABM7_9BACI
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:KFI91590.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
TetR family transcriptional regulator
L3_079_062G1_scaffold_86_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4878..5537
DNA (660bp) protein (220aa)
maa; maltose O-acetyltransferase (EC:2.3.1.18)
Bacterial transferase hexapeptide repeat protein n=2 Tax=Bifidobacterium dentium RepID=E0Q542_9BIFI
Putative maltose O-acetyltransferase {ECO:0000313|EMBL:ETO95672.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_079_062G1_scaffold_86_5
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5613..6203
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D8G1_PAESJ
Uncharacterized protein {ECO:0000313|EMBL:KFI61297.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
hypothetical protein
L3_079_062G1_scaffold_86_6
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6465..8459
DNA (1995bp) protein (665aa)
Histidine acid phosphatase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DAE8_BIFLN
Histidine acid phosphatase {ECO:0000313|EMBL:KFI89050.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Histidine acid phosphatase.
L3_079_062G1_scaffold_86_7
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8732..10123
DNA (1392bp) protein (464aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RQN5_9BIFI
L3_079_062G1_scaffold_86_8
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10120..11286
DNA (1167bp) protein (389aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hisC; Histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y1S2_BIFBU
L3_079_062G1_scaffold_86_9
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11409..12008
DNA (600bp) protein (200aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=2 Tax=Bifidobacterium dentium RepID=E0Q5C0_9BIFI
L3_079_062G1_scaffold_86_10
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12008..12697
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GQQ4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI84568.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hypothetical protein
L3_079_062G1_scaffold_86_11
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12754..13401
DNA (648bp) protein (216aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Imidazole glycerol phosphate synthase subunit HisH n=3 Tax=Bifidobacterium RepID=A1A2H3_BIFAA
imidazole glycerol phosphate synthase subunit HisH
L3_079_062G1_scaffold_86_12
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13462..14190
DNA (729bp) protein (243aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
phosphoribosyl isomerase A (EC:5.3.1.24)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RQP0_9BIFI
L3_079_062G1_scaffold_86_13
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14254..15591
DNA (1338bp) protein (446aa)
Glutamine synthetase {ECO:0000313|EMBL:KFI84571.1}; EC=6.3.1.2 {ECO:0000313|EMBL:KFI84571.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
Glutamine synthetase n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RE71_9BIFI
glutamine synthetase
L3_079_062G1_scaffold_86_14
Bifidobacterium psychraerophilum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15883..17517
DNA (1635bp) protein (545aa)
OppA2 Oligopeptide-binding protein oppA n=4 Tax=Bifidobacterium dentium RepID=D2Q576_BIFDB
ABC-type oligopeptide transport system {ECO:0000313|EMBL:KFI81459.1}; TaxID=218140 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium psychraerophilum.;"
oppA2; oligopeptide-binding protein OppA
L3_079_062G1_scaffold_86_15
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17659..19248)
DNA (1590bp) protein (530aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0K9_BIFBP
Uncharacterized protein {ECO:0000313|EMBL:KFI61287.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
hypothetical protein
L3_079_062G1_scaffold_86_16
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19318..20235)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ58_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:KFI84575.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hypothetical protein
L3_079_062G1_scaffold_86_17
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20245..24381)
DNA (4137bp) protein (1379aa)
ATP-dependent helicase HrpA {ECO:0000313|EMBL:KFI61285.1}; EC=3.6.4.13 {ECO:0000313|EMBL:KFI61285.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
ATP-dependent helicase HrpA n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GKZ4_9BIFI
ATP-dependent helicase
L3_079_062G1_scaffold_86_18
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24461..25114)
DNA (654bp) protein (218aa)
Methyltransferase small domain protein {ECO:0000313|EMBL:KFI89034.1}; EC=2.1.1.172 {ECO:0000313|EMBL:KFI89034.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Methyltransferase small n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV57_BIFLJ
methyltransferase small
L3_079_062G1_scaffold_86_19
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25342..26862
DNA (1521bp) protein (507aa)
GTPase HflX n=9 Tax=Bifidobacterium RepID=E8ME31_BIFL2
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
GTP-binding protein
L3_079_062G1_scaffold_86_20
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27060..28022
DNA (963bp) protein (321aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
lactate dehydrogenase n=1 Tax=Bifidobacterium minimum RepID=UPI0003B4AACC
L-lactate dehydrogenase
L3_079_062G1_scaffold_86_21
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28364..29311
DNA (948bp) protein (316aa)
CzcD Cobalt-zinc-cadmium resistance protein n=3 Tax=Bifidobacterium bifidum RepID=E4P0L7_BIFBP
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:KFI61281.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
czcD; cobalt-zinc-cadmium resistance protein CzcD
L3_079_062G1_scaffold_86_22
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29392..30096)
DNA (705bp) protein (235aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
LexA repressor n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GTV7_9BIFI
LexA family transcriptional regulator
L3_079_062G1_scaffold_86_23
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30253..30639
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZZ66_BIFBR
Peptidoglycan-binding LysM {ECO:0000313|EMBL:KFI61279.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
LysM domain protein
L3_079_062G1_scaffold_86_24
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30682..31134
DNA (453bp) protein (151aa)
NrdR family transcriptional regulator n=1 Tax=Bifidobacterium minimum RepID=UPI0003B56B6B
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
transcriptional regulator NrdR
L3_079_062G1_scaffold_86_25
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31154..32353)
DNA (1200bp) protein (400aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KFI61277.1}; EC=1.1.1.95 {ECO:0000313|EMBL:KFI61277.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
D-3-phosphoglycerate dehydrogenase n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RFB0_9BIFI
D-3-phosphoglycerate dehydrogenase
L3_079_062G1_scaffold_86_26
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32363..34642)
DNA (2280bp) protein (760aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSA6_9BIFI
hypothetical protein
L3_079_062G1_scaffold_86_27
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34905..35414
DNA (510bp) protein (170aa)
Protein MraZ n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GPL2_9BIFI
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
MraZ family transcriptional regulator
L3_079_062G1_scaffold_86_28
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35414..36436
DNA (1023bp) protein (341aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=2 Tax=Bifidobacterium RepID=D6DCQ6_BIFLN
L3_079_062G1_scaffold_86_29
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36433..36891
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PE62_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI89023.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
membrane protein
L3_079_062G1_scaffold_86_30
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36888..38699
DNA (1812bp) protein (604aa)
Peptidoglycan synthetase {ECO:0000313|EMBL:KFI61272.1}; EC=2.4.1.129 {ECO:0000313|EMBL:KFI61272.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
ftsI; peptidoglycan synthetase (EC:2.4.1.129)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2BYE3_BIFBI
Displaying items 1-30 of 69 in total

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