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L3_079_062G1_scaffold_105

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_105_1
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(242..754)
DNA (513bp) protein (171aa)
Low molecular weight protein-tyrosine-phosphatase {ECO:0000313|EMBL:KFI88872.1}; EC=3.1.3.48 {ECO:0000313|EMBL:KFI88872.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Low molecular weight phosphotyrosine protein phosphatase n=2 Tax=Bifidobacterium bifidum RepID=E4VBV9_BIFBI
ptpA; low molecular weight protein-tyrosine-phosphatase
L3_079_062G1_scaffold_105_2
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(778..1437)
DNA (660bp) protein (220aa)
Dihydrofolate reductase {ECO:0000313|EMBL:KFI88871.1}; EC=1.5.1.3 {ECO:0000313|EMBL:KFI88871.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Dihydrofolate reductase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H0W5_9BIFI
dihydrofolate reductase
L3_079_062G1_scaffold_105_3
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1488..2294)
DNA (807bp) protein (269aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Thymidylate synthase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A498_BIFAD
Thymidylate synthase
L3_079_062G1_scaffold_105_4
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2525..2938
DNA (414bp) protein (138aa)
OsmC-like protein n=2 Tax=Bifidobacterium bifidum RepID=U2DPB0_BIFBI
Putative redox protein {ECO:0000313|EMBL:KFI88869.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
putative redox protein
L3_079_062G1_scaffold_105_5
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3099..4139)
DNA (1041bp) protein (347aa)
Universal stress protein family member n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RGD6_9BIFI
Universal stress protein family member {ECO:0000313|EMBL:KFI88868.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Universal stress protein family member
L3_079_062G1_scaffold_105_6
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4309..5073)
DNA (765bp) protein (255aa)
NlpC/P60 family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQ96_9BIFI
NlpC/P60 family protein {ECO:0000313|EMBL:KFI60326.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
hypothetical protein
L3_079_062G1_scaffold_105_7
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5166..5882)
DNA (717bp) protein (239aa)
CHAP domain protein n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RDM2_9BIFI
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KFI88866.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
CHAP domain protein
L3_079_062G1_scaffold_105_8
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6084..7085)
DNA (1002bp) protein (334aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KFI80935.1}; EC=3.5.1.28 {ECO:0000313|EMBL:KFI80935.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
surface antigen (EC:3.5.1.28)
CHAP domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8F2_9BIFI
L3_079_062G1_scaffold_105_9
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7403..8548
DNA (1146bp) protein (382aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Putative phosphoserine transaminase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A493_BIFAD
putative phosphoserine aminotransferase
L3_079_062G1_scaffold_105_10
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8585..8839
DNA (255bp) protein (85aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0D0_BIFAA
Uncharacterized protein {ECO:0000313|EMBL:KFI88863.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
hypothetical protein
L3_079_062G1_scaffold_105_11
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8865..10142)
DNA (1278bp) protein (426aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
Histidine kinase n=2 Tax=Bifidobacterium RepID=D6ZW45_BIFLJ
histidine kinase
L3_079_062G1_scaffold_105_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10305..10985
DNA (681bp) protein (227aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0C8_BIFAA
response regulator of two-component system
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_079_062G1_scaffold_105_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11306..13186
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GS76_9BIFI
Myosin-cross-reactive antigen {ECO:0000313|EMBL:AII75811.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
myosin-cross-reactive antigen
L3_079_062G1_scaffold_105_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13414..14154)
DNA (741bp) protein (247aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=4 Tax=Bifidobacterium RepID=A1A0C6_BIFAA
gpmA; phosphoglyceromutase
L3_079_062G1_scaffold_105_15
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14247..15287)
DNA (1041bp) protein (347aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI80929.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
L3_079_062G1_scaffold_105_16
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15356..16456)
DNA (1101bp) protein (367aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0C5_BIFAA
putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase
L3_079_062G1_scaffold_105_17
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16692..18377)
DNA (1686bp) protein (562aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Lysine--tRNA ligase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XW05_9BIFI
lysyl-tRNA synthetase
L3_079_062G1_scaffold_105_18
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18618..19793
DNA (1176bp) protein (392aa)
Arabinose polymer MFS transporter n=3 Tax=Bifidobacterium bifidum RepID=K2HS27_BIFBI
Arabinose polymer MFS transporter {ECO:0000313|EMBL:KFI88856.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
araJ; arabinose polymer MFS transporter
L3_079_062G1_scaffold_105_19
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19981..22215
DNA (2235bp) protein (745aa)
Uncharacterized protein n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RHH3_9BIFI
Tetratricopeptide repeat protein {ECO:0000313|EMBL:KFI80925.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hypothetical protein
L3_079_062G1_scaffold_105_20
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22284..22892
DNA (609bp) protein (203aa)
Uncharacterized protein n=5 Tax=Bifidobacterium bifidum RepID=I3WJK4_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI88854.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
hypothetical protein
L3_079_062G1_scaffold_105_21
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22896..23474)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CG02_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI60340.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
hypothetical protein
L3_079_062G1_scaffold_105_22
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23467..25296)
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P009_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI60341.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
hypothetical protein
L3_079_062G1_scaffold_105_23
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25410..26810
DNA (1401bp) protein (467aa)
Putative histidine kinase sensor of two component system n=2 Tax=Bifidobacterium bifidum RepID=I3WJK7_BIFBI
Histidine kinase sensor of two component system {ECO:0000313|EMBL:KFI88851.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
putative histidine kinase sensor of two component system
L3_079_062G1_scaffold_105_24
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26803..27507
DNA (705bp) protein (235aa)
Response regulator of two-component system n=3 Tax=Bifidobacterium bifidum RepID=K2I5Y4_BIFBI
Two-component system response regulator {ECO:0000313|EMBL:KFI80920.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
two-component system response regulator
L3_079_062G1_scaffold_105_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27557..28576)
DNA (1020bp) protein (340aa)
UDP-glucose 4-epimerase n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G3V9_BIFLO
UDP-galactose-4-epimerase {ECO:0000313|EMBL:KEY26273.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
galE1; UDP-glucose 4-epimerase
L3_079_062G1_scaffold_105_26
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28594..30099)
DNA (1506bp) protein (502aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
Galactose-1-phosphate uridylyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MVN2_BIFL1
galactose-1-phosphate uridylyltransferase
L3_079_062G1_scaffold_105_27
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30099..31175)
DNA (1077bp) protein (359aa)
N-acetylhexosamine kinase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WI57_BIFBI
N-acetylhexosamine kinase {ECO:0000313|EMBL:KFI80918.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
N-acetylhexosamine kinase
L3_079_062G1_scaffold_105_28
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31250..33499)
DNA (2250bp) protein (750aa)
Lacto-N-biose phosphorylase {ECO:0000313|EMBL:KFI88847.1}; EC=2.4.1.211 {ECO:0000313|EMBL:KFI88847.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Lacto-N-biose phosphorylase n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DQH2_BIFLD
lacto-N-biose phosphorylase
L3_079_062G1_scaffold_105_29
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33612..34553)
DNA (942bp) protein (314aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=13 Tax=Bifidobacterium longum RepID=D6DC17_BIFLN
ABC transporter, permease protein {ECO:0000313|EMBL:KFI88846.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
sugar ABC transporter permease
L3_079_062G1_scaffold_105_30
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34550..35515)
DNA (966bp) protein (322aa)
Permease of ABC transporter for sugars n=2 Tax=Bifidobacterium longum RepID=Q8G3W4_BIFLO
ABC transporter, permease protein {ECO:0000313|EMBL:KFI88845.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
permease of ABC transporter for sugars
Displaying items 1-30 of 84 in total

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