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L3_079_062G1_scaffold_200

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_200_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(247..1860)
DNA (1614bp) protein (538aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3W1_BACVU
Putative lipoprotein {ECO:0000313|EMBL:EFG19458.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_079_062G1_scaffold_200_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1879..5226)
DNA (3348bp) protein (1116aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L2F1_BACV8
hypothetical protein
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOS06193.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_062G1_scaffold_200_3
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5447..6373)
DNA (927bp) protein (309aa)
Sigma factor regulatory protein, FecR/PupR family n=5 Tax=Bacteroides RepID=D4V3W3_BACVU
anti-sigma factor
Anti-sigma factor {ECO:0000313|EMBL:EFV67490.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_079_062G1_scaffold_200_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6600..7850
DNA (1251bp) protein (417aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Phosphoglycerate kinase n=7 Tax=Bacteroides RepID=A6L2F3_BACV8
L3_079_062G1_scaffold_200_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7925..9139)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9J6I0_BACVU
outer membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82104.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_062G1_scaffold_200_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9274..10104)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L2F5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39869.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_062G1_scaffold_200_7
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10338..12761)
DNA (2424bp) protein (808aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NUJ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17099.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
beta-N-acetylhexosaminidase
L3_079_062G1_scaffold_200_8
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12962..14053
DNA (1092bp) protein (364aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z5T1_9BACE
Transmembrane protein {ECO:0000313|EMBL:EFV67464.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
transmembrane protein
L3_079_062G1_scaffold_200_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14078..14638
DNA (561bp) protein (187aa)
RNA polymerase sigma-70 factor n=7 Tax=Bacteroides RepID=C6Z5T2_9BACE
RNA polymerase ECF-type sigma factor
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EIY82100.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_062G1_scaffold_200_10
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14697..16052)
DNA (1356bp) protein (452aa)
Outer membrane protein transport protein, Ompp1/FadL/TodX family n=2 Tax=Bacteroides RepID=C6Z5T3_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFV67466.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
outer membrane protein
L3_079_062G1_scaffold_200_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16392..17714
DNA (1323bp) protein (441aa)
MATE efflux family protein n=4 Tax=Bacteroides RepID=D4V3X1_BACVU
antiporter membrane protein
MATE efflux family protein {ECO:0000313|EMBL:KDS55801.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_062G1_scaffold_200_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


17813..19135
DNA (1323bp) protein (441aa)
Signal recognition particle protein n=7 Tax=Bacteroides RepID=A6L2G1_BACV8
signal recognition protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_079_062G1_scaffold_200_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19249..20130
DNA (882bp) protein (294aa)
Bifunctional protein FolD n=7 Tax=Bacteroides RepID=FOLD_BACV8
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_062G1_scaffold_200_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21070..22143
DNA (1074bp) protein (358aa)
Capsule biosynthesis protein n=2 Tax=Bacteroides vulgatus RepID=A6L2G3_BACV8
capsule biosynthesis protein
Poly-gamma-glutamate synthesis protein (Capsule biosynthesis protein) {ECO:0000313|EMBL:EOS06205.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_062G1_scaffold_200_15
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22371..22937
DNA (567bp) protein (189aa)
RNA polymerase ECF-type sigma factor n=5 Tax=Bacteroides RepID=A6L2G4_BACV8
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDF17107.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_062G1_scaffold_200_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23010..24089
DNA (1080bp) protein (360aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Bacteroides vulgatus RepID=D4V3X6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS06207.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
anti-sigma factor
L3_079_062G1_scaffold_200_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24147..27641
DNA (3495bp) protein (1165aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UII2_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY82083.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
membrane protein
L3_079_062G1_scaffold_200_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27660..29051
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A3Z8_BACVU
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS55792.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_079_062G1_scaffold_200_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29063..30439
DNA (1377bp) protein (459aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EFG19476.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EFG19476.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Antioxidant, AhpC/TSA family n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3X9_BACVU
thiol-disulfide oxidoreductase
L3_079_062G1_scaffold_200_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30447..31625
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HQY9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS06211.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
thiol-disulfide oxidoreductase
L3_079_062G1_scaffold_200_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32229..33212
DNA (984bp) protein (328aa)
para-aminobenzoate synthase component I (EC:2.6.1.85)
Para-aminobenzoate synthase component I n=2 Tax=Bacteroides vulgatus RepID=D4VCN4_BACVU
Chorismate binding enzyme family protein {ECO:0000313|EMBL:KDS55779.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_062G1_scaffold_200_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33196..33789
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L2I0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39894.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_062G1_scaffold_200_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33879..35021
DNA (1143bp) protein (381aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9A3Y3_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS06214.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_079_062G1_scaffold_200_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35018..36214)
DNA (1197bp) protein (399aa)
Transporter, major facilitator family protein n=3 Tax=Bacteroides vulgatus RepID=D4VCN7_BACVU
transmembrane transport protein
Putative transmembrane transport protein {ECO:0000313|EMBL:ABR39896.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_062G1_scaffold_200_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(36342..37376)
DNA (1035bp) protein (345aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Phenylalanine--tRNA ligase alpha subunit n=6 Tax=Bacteroides RepID=SYFA_BACV8
L3_079_062G1_scaffold_200_26
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37488..38348
DNA (861bp) protein (287aa)
Uncharacterized protein n=7 Tax=root RepID=C6Z5F7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET16116.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_079_062G1_scaffold_200_27
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38360..39373
DNA (1014bp) protein (338aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=3 Tax=Bacteroides RepID=C6Z5F8_9BACE
UDP-N-acetylenolpyruvoylglucosamine reductase
L3_079_062G1_scaffold_200_28
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39382..40158
DNA (777bp) protein (259aa)
Metallo-beta-lactamase domain protein n=4 Tax=Bacteroides RepID=D1JZS9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY38409.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
hydrolase
L3_079_062G1_scaffold_200_29
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40153..40866)
DNA (714bp) protein (238aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
Endonuclease III n=3 Tax=Bacteroides RepID=B6W1H6_9BACE
endonuclease III
L3_079_062G1_scaffold_200_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40915..41835
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A2U1_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY82060.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
cytochrome C biogenesis protein CcmF
Displaying items 1-30 of 40 in total

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