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L3_079_062G1_scaffold_222

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_222_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..334
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64PB2_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ76914.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_079_062G1_scaffold_222_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

473..655
DNA (183bp) protein (61aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=E1WMW9_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ17742.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
L3_079_062G1_scaffold_222_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

598..1191
DNA (594bp) protein (198aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=E1WMW9_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYB08214.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_079_062G1_scaffold_222_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1518..2090)
DNA (573bp) protein (191aa)
DNA-3-methyladenine glycosylase I family protein {ECO:0000313|EMBL:EYA17574.1}; EC=3.2.2.20 {ECO:0000313|EMBL:EYA17574.1};; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
DNA-3-methyladenine glycosylase I n=5 Tax=Bacteroides RepID=C6I9D9_9BACE
tag; putative DNA-3-methyladenine glycosylase I
L3_079_062G1_scaffold_222_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2289..4007
DNA (1719bp) protein (573aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EXZ51368.1}; EC=3.1.-.- {ECO:0000313|EMBL:EXZ51368.1};; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
Single-stranded-DNA-specific exonuclease RecJ n=4 Tax=Bacteroides RepID=D1JV74_9BACE
putative single-stranded-DNA-specific exonuclease
L3_079_062G1_scaffold_222_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4004..5908
DNA (1905bp) protein (635aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64PA6_BACFR
ATP-dependent DNA helicase RecQ
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:BAD50675.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_062G1_scaffold_222_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5971..6933
DNA (963bp) protein (321aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=E1WMX3_BACF6
hypothetical protein
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:EYE43979.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_079_062G1_scaffold_222_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7001..8236)
DNA (1236bp) protein (412aa)
Transporter, major facilitator family protein n=2 Tax=Bacteroides RepID=D1JV77_9BACE
putative transport related, membrane protein
Major Facilitator Superfamily protein {ECO:0000313|EMBL:EXZ93119.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
L3_079_062G1_scaffold_222_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8242..9900)
DNA (1659bp) protein (553aa)
Sialidase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64PA3_BACFR
BNR repeat-like domain protein {ECO:0000313|EMBL:EYB08222.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
sialidase
L3_079_062G1_scaffold_222_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9924..11024)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=6 Tax=Bacteroides fragilis RepID=I3HND7_BACFG
BNR repeat-like domain protein {ECO:0000313|EMBL:EXZ03958.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
hypothetical protein
L3_079_062G1_scaffold_222_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11117..12577)
DNA (1461bp) protein (487aa)
Putative lipoprotein n=1 Tax=Bacteroides fragilis CAG:47 RepID=R6YRN7_9BACE
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:EYA37421.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
putative lipoprotein
L3_079_062G1_scaffold_222_12
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12591..15887)
DNA (3297bp) protein (1099aa)
Putative exported protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WMX8_BACF6
hypothetical protein
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEZ24906.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_079_062G1_scaffold_222_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15977..16885)
DNA (909bp) protein (303aa)
N-acetylneuraminate lyase n=10 Tax=root RepID=C6I9E8_9BACE
putative N-acetylneuraminate lyase (sialic acid lyase)
Putative N-acetylneuraminate lyase {ECO:0000313|EMBL:BAD50682.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_062G1_scaffold_222_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17091..17813)
DNA (723bp) protein (241aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C6I9E9_9BACE
GntR family transcriptional regulator
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EYB08227.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_079_062G1_scaffold_222_15
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18242..19126
DNA (885bp) protein (295aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I9AV61_BACFG
Uncharacterized protein {ECO:0000313|EMBL:CDD38647.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
putative prefrenate dehydratase
L3_079_062G1_scaffold_222_16
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19101..20285
DNA (1185bp) protein (395aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=I3HNE3_BACFG
putative aminotransferase
Putative aminotransferase {ECO:0000313|EMBL:CDD38648.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_062G1_scaffold_222_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20308..21369
DNA (1062bp) protein (354aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=13 Tax=Bacteroides RepID=I3HNE4_BACFG
putative chorismate mutase
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EKA83868.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_079_062G1_scaffold_222_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21385..22158
DNA (774bp) protein (258aa)
Prephenate dehydratase n=14 Tax=Bacteroides RepID=Q64P94_BACFR
putative prephenate dehydrogenase family protein
Prephenate dehydrogenase family protein {ECO:0000313|EMBL:EYE42105.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_079_062G1_scaffold_222_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22277..22537)
DNA (261bp) protein (87aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=I0PZ37_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EYE42106.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_079_062G1_scaffold_222_20
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22881..24908
DNA (2028bp) protein (676aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
DNA primase n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I9F5_9BACE
putative DNA primase
L3_079_062G1_scaffold_222_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24943..26535)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C6I9F6_9BACE
putative secreted sulfatase ydeN precursor
Putative secreted sulfatase ydeN {ECO:0000313|EMBL:BAD50690.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_062G1_scaffold_222_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26562..28043)
DNA (1482bp) protein (494aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I9AUG0_BACFG
putative exported uslfatase
Type I phosphodiesterase / nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:EYA17593.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
L3_079_062G1_scaffold_222_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28128..29735)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=E1WMY9_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY92758.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_079_062G1_scaffold_222_24
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29749..33126)
DNA (3378bp) protein (1126aa)
TonB-linked outer membrane protein, SusC/RagA family n=5 Tax=Bacteroides RepID=D1JV93_9BACE
putative outer membrane protein probably involved in nutrient binding
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEZ24918.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_079_062G1_scaffold_222_25
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33292..34224)
DNA (933bp) protein (311aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C6I9G0_9BACE
hypothetical protein
Putative anti-sigma factor {ECO:0000313|EMBL:CDD38664.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_062G1_scaffold_222_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34300..34878)
DNA (579bp) protein (193aa)
RNA polymerase sigma-70 factor, expansion family 1 n=13 Tax=Bacteroides RepID=C6I9G1_9BACE
putative RNA polymerase sigma factor
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAD50695.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_062G1_scaffold_222_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35006..35590)
DNA (585bp) protein (195aa)
folE; putative GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
GTP cyclohydrolase 1 n=14 Tax=Bacteroides RepID=GCH1_BACFN
L3_079_062G1_scaffold_222_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35593..36042)
DNA (450bp) protein (150aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=Q64P84_BACFR
hypothetical protein
Sporulation related domain protein {ECO:0000313|EMBL:EYE42116.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_079_062G1_scaffold_222_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36119..36874)
DNA (756bp) protein (252aa)
tpiA; putative triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
Triosephosphate isomerase n=13 Tax=Bacteroides RepID=TPIS_BACFN
L3_079_062G1_scaffold_222_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36923..38254)
DNA (1332bp) protein (444aa)
DoxX family protein n=3 Tax=Bacteroides RepID=D1JV99_9BACE
DoxX family protein {ECO:0000313|EMBL:EXY26038.1}; TaxID=1339284 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T10.;"
hypothetical protein
Displaying items 1-30 of 41 in total

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