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L3_079_062G1_scaffold_223

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_223_1
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

355..879
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FBZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98267.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_079_062G1_scaffold_223_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

884..1216
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F0D6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGX72116.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_079_062G1_scaffold_223_3
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1203..2651
DNA (1449bp) protein (483aa)
Uncharacterized protein n=2 Tax=root RepID=R5F3V3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98269.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_079_062G1_scaffold_223_4
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2681..3865
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5EZS4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98270.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_079_062G1_scaffold_223_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3875..4279
DNA (405bp) protein (135aa)
Uncharacterized protein n=3 Tax=root RepID=B6FKD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83489.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_079_062G1_scaffold_223_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4279..5397
DNA (1119bp) protein (373aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L105_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13295.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_079_062G1_scaffold_223_7
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5404..7599
DNA (2196bp) protein (732aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WTP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72111.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Type IV secretory pathway, VirD4 components
L3_079_062G1_scaffold_223_8
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7707..8231
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SYN8_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98135.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_079_062G1_scaffold_223_9
unknown

Not on your lists

8215..9081
DNA (867bp) protein (289aa)

This feature has no annotations

L3_079_062G1_scaffold_223_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9320..9697
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=3 Tax=Clostridiales RepID=D4L104_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13294.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_079_062G1_scaffold_223_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9752..10594
DNA (843bp) protein (281aa)
Uncharacterized protein n=4 Tax=root RepID=B6FKD7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEA83496.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_079_062G1_scaffold_223_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10607..11017
DNA (411bp) protein (137aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=B6FKD8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEA83497.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_079_062G1_scaffold_223_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11030..11542
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C7GFU0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU99318.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_079_062G1_scaffold_223_14
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11635..13131
DNA (1497bp) protein (499aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WTN6_9FIRM
Domain of unknown function DUF87.
Uncharacterized protein {ECO:0000313|EMBL:EGX72106.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L3_079_062G1_scaffold_223_15
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13812..15635
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K0N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS37062.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
group II intron reverse transcriptase maturase
L3_079_062G1_scaffold_223_16
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15773..16672
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7ANE5_9FIRM
Domain of unknown function DUF87.
Putative uncharacterized protein {ECO:0000313|EMBL:EEC58680.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
L3_079_062G1_scaffold_223_17
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16789..18021
DNA (1233bp) protein (411aa)
Site-specific recombinase phage integrase family n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KXD5_9FIRM
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CCY69764.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
integrase family protein
L3_079_062G1_scaffold_223_18
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18014..18982
DNA (969bp) protein (323aa)
Integrase family protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KSD6_9FIRM
Integrase family protein {ECO:0000313|EMBL:CCY69765.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
integrase family protein
L3_079_062G1_scaffold_223_19
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18966..20003
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5L8Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY69766.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
integrase family protein
L3_079_062G1_scaffold_223_20
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20244..22166
DNA (1923bp) protein (641aa)
NlpC/P60 family protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C8H7_9CLOT
NlpC/P60 family protein {ECO:0000313|EMBL:EFE13814.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L3_079_062G1_scaffold_223_21

Not on your lists

22217..23113
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=human gut metagenome RepID=K1TZN5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC73039.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_079_062G1_scaffold_223_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23141..23359
DNA (219bp) protein (73aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B6FKE3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09858.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_079_062G1_scaffold_223_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23356..23724
DNA (369bp) protein (123aa)
Uncharacterized protein n=4 Tax=root RepID=D4C8H4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91199.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_079_062G1_scaffold_223_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23739..31391
DNA (7653bp) protein (2551aa)
DNA methylase n=8 Tax=root RepID=D4JMP4_9FIRM
DNA methylase {ECO:0000313|EMBL:CBK92248.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
DNA methylase
L3_079_062G1_scaffold_223_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31354..32022
DNA (669bp) protein (223aa)
LPXTG-site transpeptidase (Sortase) family protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L0Z4_9FIRM
LPXTG-site transpeptidase (sortase) family protein
LPXTG-site transpeptidase (Sortase) family protein {ECO:0000313|EMBL:CBL13284.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_079_062G1_scaffold_223_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32015..32413
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B6FKE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83506.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_079_062G1_scaffold_223_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32417..33106
DNA (690bp) protein (230aa)
Uncharacterized protein, involved in the regulation of septum location n=2 Tax=Clostridiales RepID=D4KSL1_9FIRM
Uncharacterized protein, involved in the regulation of septum location
Uncharacterized protein, involved in the regulation of septum location {ECO:0000313|EMBL:CBL09863.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_079_062G1_scaffold_223_28
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33167..34087
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AQI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ30391.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L3_079_062G1_scaffold_223_29
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34342..34860
DNA (519bp) protein (173aa)
ParB-like partition protein n=2 Tax=Lachnospiraceae bacterium A2 RepID=R9KCU5_9FIRM
ParB-like partition protein {ECO:0000313|EMBL:EOS44264.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
ParB-like partition protein
L3_079_062G1_scaffold_223_30
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34751..35440)
DNA (690bp) protein (230aa)
Helix-turn-helix n=3 Tax=Firmicutes RepID=D4ML05_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL34438.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Displaying items 1-30 of 41 in total

View Taxonomy