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L3_079_062G1_scaffold_243

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_243_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..725
DNA (723bp) protein (241aa)
Peptidase, M23 family n=2 Tax=Clostridiales RepID=U2B1H5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32799.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Membrane protein related to metalloendopeptidase
L3_079_062G1_scaffold_243_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

850..1980
DNA (1131bp) protein (377aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
C-terminal processing peptidase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF59_9FIRM
C-terminal processing peptidase {ECO:0000313|EMBL:EHO32798.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G1_scaffold_243_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2040..3482
DNA (1443bp) protein (481aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32797.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative MerR family transcriptional regulator
L3_079_062G1_scaffold_243_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3570..4811)
DNA (1242bp) protein (414aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32796.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
multitransmembrane protein
L3_079_062G1_scaffold_243_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4897..6465)
DNA (1569bp) protein (523aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32795.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
alkaline phosphatase
L3_079_062G1_scaffold_243_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6777..7196
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32794.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Protein of unknown function (DUF2992).
L3_079_062G1_scaffold_243_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7265..7978
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32793.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G1_scaffold_243_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8131..8604
DNA (474bp) protein (158aa)
Transcription elongation factor GreA n=3 Tax=Clostridiales RepID=G9YWW9_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
greA; transcription elongation factor GreA
L3_079_062G1_scaffold_243_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8616..10565
DNA (1950bp) protein (650aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase n=2 Tax=Clostridiales RepID=G9YWW8_9FIRM
L3_079_062G1_scaffold_243_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10796..12178
DNA (1383bp) protein (461aa)
TrkH family potassium uptake protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF51_9FIRM
TrkH family potassium uptake protein {ECO:0000313|EMBL:EHO32790.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative cation transport protein, Trk family
L3_079_062G1_scaffold_243_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12217..12870
DNA (654bp) protein (218aa)
Putative Ktr system potassium uptake protein A n=2 Tax=Clostridiales RepID=G9YWW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54591.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ktrC; NAD-binding site
L3_079_062G1_scaffold_243_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12882..13640
DNA (759bp) protein (253aa)
RNA methyltransferase (EC:2.1.1.-)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54592.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_079_062G1_scaffold_243_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13731..14939
DNA (1209bp) protein (403aa)
DNA protecting protein DprA n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF48_9FIRM
DNA protecting protein DprA {ECO:0000313|EMBL:EHO32787.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative smf protein
L3_079_062G1_scaffold_243_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14961..17291
DNA (2331bp) protein (777aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF47_9FIRM
L3_079_062G1_scaffold_243_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17370..18083
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32785.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
TraX family protein
L3_079_062G1_scaffold_243_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18105..18722
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32784.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G1_scaffold_243_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18744..20048
DNA (1305bp) protein (435aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
trmFO; tRNA methyltransferase (EC:2.1.1.74)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF44_9FIRM
L3_079_062G1_scaffold_243_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20172..20426)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YWV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32782.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G1_scaffold_243_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20481..20750
DNA (270bp) protein (90aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B895_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI68430.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
transcriptional repressor of PBSX genes
L3_079_062G1_scaffold_243_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21217..22239
DNA (1023bp) protein (341aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
plsX; acyl-ACP--phosphate acyltransferase (EC:2.3.1.-)
Phosphate acyltransferase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWV7_9FIRM
L3_079_062G1_scaffold_243_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22344..22577
DNA (234bp) protein (78aa)
Acyl carrier protein n=3 Tax=Clostridiales RepID=G9YWV6_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
acp; acyl carrier protein
L3_079_062G1_scaffold_243_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22643..23320
DNA (678bp) protein (226aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=2 Tax=Clostridiales RepID=G9YWV5_9FIRM
L3_079_062G1_scaffold_243_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23400..23528
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ARF4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68414.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_079_062G1_scaffold_243_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23832..27401
DNA (3570bp) protein (1190aa)
Chromosome partition protein Smc n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF37_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
smc; chromosome segregation protein SMC
L3_079_062G1_scaffold_243_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27883..28158
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32775.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G1_scaffold_243_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28182..29081
DNA (900bp) protein (300aa)
Signal recognition particle receptor FtsY n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CGN4_9CLOT
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
signal recognition particle-docking protein FtsY
L3_079_062G1_scaffold_243_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29140..29856
DNA (717bp) protein (239aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=3 Tax=Clostridiales RepID=G9YWV0_9FIRM
L3_079_062G1_scaffold_243_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


29861..30451
DNA (591bp) protein (197aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rdgB; nucleoside-triphosphatase (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=2 Tax=Clostridiales RepID=H1CF33_9FIRM
L3_079_062G1_scaffold_243_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30494..30817
DNA (324bp) protein (108aa)
RNA-binding protein, YhbY family n=2 Tax=Clostridiales RepID=U2B885_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32771.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G1_scaffold_243_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30837..32045
DNA (1209bp) protein (403aa)
Nicotinate-nucleotide adenylyltransferase {ECO:0000256|SAAS:SAAS00086517}; EC=2.7.7.18 {ECO:0000256|SAAS:SAAS00086517};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
nadD; nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
Nicotinate (Nicotinamide) nucleotide adenylyltransferase n=2 Tax=Clostridiales RepID=H1CF31_9FIRM
Displaying items 1-30 of 43 in total

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