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L3_079_062G1_scaffold_295

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_295_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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200..739
DNA (540bp) protein (180aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBV2_9ACTN
holo-ACP synthase
L3_079_062G1_scaffold_295_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

740..2356
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:398 RepID=R6Z814_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73941.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
carbohydrate kinase
L3_079_062G1_scaffold_295_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2359..3504
DNA (1146bp) protein (382aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBV5_9ACTN
L3_079_062G1_scaffold_295_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3513..4133
DNA (621bp) protein (207aa)
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EBA38849.1}; EC=3.2.2.- {ECO:0000313|EMBL:EBA38849.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Uracil-DNA glycosylase, family 4 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBV6_9ACTN
phage SPO1 DNA polymerase-related protein
L3_079_062G1_scaffold_295_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4146..4652
DNA (507bp) protein (169aa)
Hydrolase, P-loop family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBV7_9ACTN
Hydrolase, P-loop family {ECO:0000313|EMBL:EBA38850.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_062G1_scaffold_295_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


4639..7023
DNA (2385bp) protein (795aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|SAAS:SAAS00182339};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
(50S ribosomal protein S18P)-alanine acetyltransferase (EC:2.3.1.128)
Putative glycoprotease GCP n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBV8_9ACTN
L3_079_062G1_scaffold_295_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7835..9724
DNA (1890bp) protein (630aa)
Carbon starvation protein CstA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBW1_9ACTN
Carbon starvation protein CstA {ECO:0000313|EMBL:EBA38853.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
carbon starvation protein CstA
L3_079_062G1_scaffold_295_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9884..12091
DNA (2208bp) protein (736aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBW2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73935.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Microtubule/TRAF3 and DISC1 binding protein
L3_079_062G1_scaffold_295_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12723..13628)
DNA (906bp) protein (302aa)
Putative peptidoglycan binding domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z898_9ACTN
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:CDA35085.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
peptidoglycan-binding domain 1 protein
L3_079_062G1_scaffold_295_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13767..14792)
DNA (1026bp) protein (342aa)
geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase (EC:2.5.1.29 2.5.1.10)
Polyprenyl synthetase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBW4_9ACTN
Polyprenyl synthetase {ECO:0000313|EMBL:EBA38857.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_079_062G1_scaffold_295_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14906..17323)
DNA (2418bp) protein (806aa)
PTS system maltose-specific EIICB component n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBW5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73932.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PTS system maltose-specific IIB/IIC components
L3_079_062G1_scaffold_295_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17586..18305
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHX9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36179.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
GntR family transcriptional regulator
L3_079_062G1_scaffold_295_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18612..19928
DNA (1317bp) protein (439aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBX0_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EBA38863.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
family 1 extracellular solute-binding protein
L3_079_062G1_scaffold_295_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20016..20870
DNA (855bp) protein (285aa)
ABC transporter, permease protein n=2 Tax=Collinsella RepID=A4EBX1_9ACTN
ABC transporter permease protein {ECO:0000313|EMBL:CDA36177.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
binding-protein-dependent transport system inner membrane protein
L3_079_062G1_scaffold_295_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20870..21709
DNA (840bp) protein (280aa)
ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZP74_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73928.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
binding-protein-dependent transport system inner membrane protein
L3_079_062G1_scaffold_295_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21778..22977
DNA (1200bp) protein (400aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBX3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73927.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter-like protein
L3_079_062G1_scaffold_295_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23355..25622)
DNA (2268bp) protein (756aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHX6_9ACTN
L3_079_062G1_scaffold_295_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25751..27256)
DNA (1506bp) protein (502aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBX5_9ACTN
L3_079_062G1_scaffold_295_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27476..28537)
DNA (1062bp) protein (354aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EBA38870.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EBA38870.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
UDP-glucose 4-epimerase n=2 Tax=Collinsella RepID=A4EBX7_9ACTN
UDP-glucose 4-epimerase
L3_079_062G1_scaffold_295_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28804..30009
DNA (1206bp) protein (402aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBX8_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EBA38871.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_062G1_scaffold_295_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30231..31193)
DNA (963bp) protein (321aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBD6_9ACTN
L3_079_062G1_scaffold_295_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31377..32405
DNA (1029bp) protein (343aa)
Sugar-binding domain protein n=2 Tax=Collinsella RepID=A4EBY0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73993.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
LacI family transcriptional regulator
L3_079_062G1_scaffold_295_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32654..33142
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=uncultured Collinsella sp. SMG3 RepID=H6WNQ0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73992.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_062G1_scaffold_295_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33181..33948
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=uncultured Collinsella sp. SMG3 RepID=H6WNP9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73991.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
GntR family transcriptional regulator
L3_079_062G1_scaffold_295_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33933..34646
DNA (714bp) protein (238aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBY3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73990.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
GntR family transcriptional regulator
L3_079_062G1_scaffold_295_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34846..35961
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI00034BFAD4
Uncharacterized protein {ECO:0000313|EMBL:KGI73989.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
sugar isomerase (SIS)
L3_079_062G1_scaffold_295_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36022..36216
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9F9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73988.1}; Flags: Fragment;; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
glucosamine-fructose-6-phosphate aminotransferase
Displaying 27 items

View Taxonomy