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L3_079_062G1_scaffold_357

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_357_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(460..2535)
DNA (2076bp) protein (692aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WS58_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXY73745.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
L3_079_062G1_scaffold_357_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3489..3896)
DNA (408bp) protein (136aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=E1WS60_BACF6
hypothetical protein
Putative general stress protein {ECO:0000313|EMBL:EYE46565.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_079_062G1_scaffold_357_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4107..4928)
DNA (822bp) protein (274aa)
Transcriptional regulator n=10 Tax=Bacteroides RepID=Q64RS5_BACFR
putative regulatory protein
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EXZ43734.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L3_079_062G1_scaffold_357_4
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4971..5336)
DNA (366bp) protein (122aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=Q64RS4_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD44221.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_062G1_scaffold_357_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5442..6248)
DNA (807bp) protein (269aa)
Transcriptional regulator, AraC family n=5 Tax=Bacteroides RepID=D1JTD7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY90872.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative regulatory protein
L3_079_062G1_scaffold_357_6
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6634..10395)
DNA (3762bp) protein (1254aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JTD6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ25329.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
hypothetical protein
L3_079_062G1_scaffold_357_7
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10420..12999)
DNA (2580bp) protein (860aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I6E6_9BACE
Glycosyl hydrolase family 3 C-terminal domain protein {ECO:0000313|EMBL:EEZ25328.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
putative exported hydrolase
L3_079_062G1_scaffold_357_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13018..14022)
DNA (1005bp) protein (335aa)
MtaA/CmuA family methyltransferase n=2 Tax=Bacteroides fragilis RepID=I9GFB7_BACFG
Uroporphyrinogen decarboxylase family protein {ECO:0000313|EMBL:EXY40223.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
putative uroporphirinogen biosynthesis-related protein
L3_079_062G1_scaffold_357_9
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14031..14714)
DNA (684bp) protein (228aa)
Putative 5-methyltetrahydrofolate-homocystein methyltransferase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64RR9_BACFR
Vitamin B12 dependent methionine synthase, activation domain protein {ECO:0000313|EMBL:EEZ25326.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
putative 5-methyltetrahydrofolate-homocystein methyltransferase
L3_079_062G1_scaffold_357_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14716..15351)
DNA (636bp) protein (212aa)
Methanosarcina family methyltransferase cognate corrinoid protein n=4 Tax=Bacteroides RepID=C6I6E9_9BACE
putative dimethylamine corrinoid protein
Methanosarcina family methyltransferase cognate corrinoid protein {ECO:0000313|EMBL:EIY45291.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_079_062G1_scaffold_357_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15375..16625)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6I6F0_9BACE
putative methyltransferase CmuC
Uroporphyrinogen decarboxylase family protein {ECO:0000313|EMBL:EXZ18696.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
L3_079_062G1_scaffold_357_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16639..19224)
DNA (2586bp) protein (862aa)
Putative exported hydrolase n=2 Tax=Bacteroides RepID=E1WS70_BACF6
putative exported hydrolase
Glycosyl hydrolase family 3 C-terminal domain protein {ECO:0000313|EMBL:EXZ82476.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
L3_079_062G1_scaffold_357_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19396..19938)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1GPX4_BACFG
hypothetical protein
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:EXZ27889.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
L3_079_062G1_scaffold_357_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19979..21034)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=E1WS71_BACF6
hypothetical protein
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:EXZ77816.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_079_062G1_scaffold_357_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21055..24390)
DNA (3336bp) protein (1112aa)
SusC/RagA family TonB-linked outer membrane protein n=4 Tax=Bacteroides RepID=C6I6F3_9BACE
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:EXY89913.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L3_079_062G1_scaffold_357_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24521..25546)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HLP7_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY90882.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative anti-sigma factor
L3_079_062G1_scaffold_357_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25762..26358)
DNA (597bp) protein (199aa)
RNA polymerase sigma-70 factor, expansion family 1 n=8 Tax=Bacteroides fragilis RepID=I3HLP8_BACFG
putative ECF sigma factor
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAD49819.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_062G1_scaffold_357_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26756..27349
DNA (594bp) protein (198aa)
DJ-1/PfpI family protein n=3 Tax=Bacteroides RepID=D1JTC4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXZ27866.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
hypothetical protein
L3_079_062G1_scaffold_357_19
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27540..27857
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JTC3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ25316.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
hypothetical protein
L3_079_062G1_scaffold_357_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27928..28320)
DNA (393bp) protein (131aa)
MutT/NUDIX family protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64RQ9_BACFR
MutT/NUDIX family protein
Putative CTP pyrophosphohydrolase {ECO:0000313|EMBL:EXZ18477.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
L3_079_062G1_scaffold_357_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28471..29445
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1G1M4_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EYA18494.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
hypothetical protein
L3_079_062G1_scaffold_357_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29644..30561
DNA (918bp) protein (306aa)
Ribosomal RNA large subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036602}; EC=2.1.1.181 {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036596};; 23S rRNA mA1618 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; rRNA adenine N-6-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
Ribosomal RNA large subunit methyltransferase F n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1FWK9_BACFG
hypothetical protein
L3_079_062G1_scaffold_357_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30439..30711)
DNA (273bp) protein (91aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=Q64RQ4_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY45305.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_079_062G1_scaffold_357_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30841..31314
DNA (474bp) protein (158aa)
Uncharacterized protein n=5 Tax=Bacteroides fragilis RepID=I3HLQ5_BACFG
putative arsenate reductase
Uncharacterized protein {ECO:0000313|EMBL:EIY97375.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
L3_079_062G1_scaffold_357_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31320..34985)
DNA (3666bp) protein (1222aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=Q5LBA5_BACFN
Uncharacterized protein {ECO:0000313|EMBL:EIY45307.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
hypothetical protein
L3_079_062G1_scaffold_357_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34969..35529)
DNA (561bp) protein (187aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=E1WS82_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD49830.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_062G1_scaffold_357_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35663..36877)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I6G9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EYE43472.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
hypothetical protein
L3_079_062G1_scaffold_357_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36909..37868)
DNA (960bp) protein (320aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I3HLQ9_BACFG
EamA-like transporter family protein {ECO:0000313|EMBL:EXZ27841.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
hypothetical protein
L3_079_062G1_scaffold_357_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38869..40368)
DNA (1500bp) protein (500aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LWC3_9BACE
Cation transport family protein {ECO:0000313|EMBL:EXY64970.1}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
Trk system K+ uptake protein TrkH
L3_079_062G1_scaffold_357_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40572..41261)
DNA (690bp) protein (230aa)
Transcriptional regulator, AraC family n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JTB1_9BACE
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EYE46425.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
putative AraC-family regulatory protein
Displaying items 1-30 of 45 in total

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