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L3_079_062G1_scaffold_362

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_362_1
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..616
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Bacteroides propionicifaciens RepID=UPI000376C678
Glycosyl hydrolase family 16 {ECO:0000313|EMBL:CDA72608.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
Beta-glucanase/Beta-glucan synthetase
L3_079_062G1_scaffold_362_2
Bacteroides sp. CAG:1076, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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635..3829
DNA (3195bp) protein (1065aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Bacteroides sp. CAG:1076 RepID=R5MXJ1_9BACE
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CCY90036.1}; TaxID=1262735 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1076.;"
Outer membrane receptor proteins, mostly Fe transport
L3_079_062G1_scaffold_362_3
Bacteroides sp. CAG:1076, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3866..5542
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:1076 RepID=R5MK36_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY90034.1}; TaxID=1262735 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1076.;"
hypothetical protein
L3_079_062G1_scaffold_362_4
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5583..6839
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CM49_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA72611.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_079_062G1_scaffold_362_5
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6863..9190
DNA (2328bp) protein (776aa)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Bacteroides sp. CAG:443 RepID=R6MGK5_9BACE
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:CDB97750.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
glycoside hydrolase
L3_079_062G1_scaffold_362_6
unknown

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comp(9415..9669)
DNA (255bp) protein (85aa)

This feature has no annotations

L3_079_062G1_scaffold_362_7
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10431..12482)
DNA (2052bp) protein (684aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
DNA helicase II/ATP-dependent DNA helicase PcrA n=1 Tax=Bacteroides stercoris CC31F RepID=S3YWW1_BACSE
L3_079_062G1_scaffold_362_8
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12619..13203
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6B5F0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA48527.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_079_062G1_scaffold_362_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13313..13582
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YIA2_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH22061.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_079_062G1_scaffold_362_10
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13616..14380)
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6AIC0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA48529.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
LuxR family transcriptional regulator
L3_079_062G1_scaffold_362_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14820..15404
DNA (585bp) protein (195aa)
Transcriptional regulator, TetR family n=7 Tax=Bacteroides RepID=B0NKW6_BACSE
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDS16991.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
putative TetR-family transcriptional regulator
L3_079_062G1_scaffold_362_12
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15433..16179
DNA (747bp) protein (249aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=5 Tax=Bacteroides RepID=B0NKW5_BACSE
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EGF49400.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
L3_079_062G1_scaffold_362_13
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16272..16943
DNA (672bp) protein (224aa)
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:EDS16989.1}; EC=5.4.99.- {ECO:0000313|EMBL:EDS16989.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
Pseudouridine synthase, RluA family n=3 Tax=Bacteroides RepID=B0NKW4_BACSE
L3_079_062G1_scaffold_362_14
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16966..19503
DNA (2538bp) protein (846aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EDS16988.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDS16988.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NKW3_BACSE
alanyl dipeptidyl peptidase
L3_079_062G1_scaffold_362_15
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19973..21397)
DNA (1425bp) protein (475aa)
Sigma-54 interaction domain protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AC36_9BACE
Sigma-54 interaction domain protein {ECO:0000313|EMBL:CDA48535.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Fis family transcriptional regulator
L3_079_062G1_scaffold_362_16
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21490..22329
DNA (840bp) protein (280aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Bacteroides RepID=R6APN5_9BACE
peptidyl-prolyl cis-trans isomerase cyclophilin type
L3_079_062G1_scaffold_362_17
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22384..23619
DNA (1236bp) protein (412aa)
Peptidase M16 inactive domain protein n=2 Tax=Bacteroides stercoris RepID=B0NKV8_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH22052.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
peptidase M16
L3_079_062G1_scaffold_362_18
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23898..25235
DNA (1338bp) protein (446aa)
MATE efflux family protein n=2 Tax=Bacteroides RepID=B0NKY7_BACSE
MATE efflux family protein {ECO:0000313|EMBL:EDS16980.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
MATE efflux family protein
L3_079_062G1_scaffold_362_19
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25292..27619
DNA (2328bp) protein (776aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AIC6_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDA48539.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
multi-sensor hybrid histidine kinase
L3_079_062G1_scaffold_362_20
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27781..28290
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YGD1_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH22049.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
Displaying 20 items

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