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L3_079_062G1_scaffold_381

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_381_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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192..2183
DNA (1992bp) protein (664aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase, B subunit protein n=2 Tax=Clostridiales RepID=U2BHH2_9CLOT
DNA gyrase, B subunit protein {ECO:0000313|EMBL:ERI77569.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_079_062G1_scaffold_381_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2408..4654
DNA (2247bp) protein (749aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM34_9FIRM
L3_079_062G1_scaffold_381_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4674..5543
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2DDG3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO22295.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G1_scaffold_381_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5667..6257
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22296.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G1_scaffold_381_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6270..7364
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22297.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G1_scaffold_381_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7635..8147)
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22298.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G1_scaffold_381_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8307..9581
DNA (1275bp) protein (425aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22299.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
L3_079_062G1_scaffold_381_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9578..11215
DNA (1638bp) protein (546aa)
2-hydroxyglutaryl-CoA dehydratase, D-component n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53905.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
CoA-substrate-specific enzyme activase, putative
L3_079_062G1_scaffold_381_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11263..13890)
DNA (2628bp) protein (876aa)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM42_9FIRM
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EHO22143.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G1_scaffold_381_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14223..14618
DNA (396bp) protein (132aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YU39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22144.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
membrane protein
L3_079_062G1_scaffold_381_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14743..15231
DNA (489bp) protein (163aa)
Sigma-70 region 2 n=3 Tax=Clostridiales RepID=G9YU40_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO22145.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RNA polymerase sigma factor, sigma-70 family
L3_079_062G1_scaffold_381_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15228..16310
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM43082.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_079_062G1_scaffold_381_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16418..17371
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22147.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
phosphotriesterase family
L3_079_062G1_scaffold_381_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17419..18834)
DNA (1416bp) protein (472aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22148.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G1_scaffold_381_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18961..20241)
DNA (1281bp) protein (427aa)
GTPase Obg n=3 Tax=Clostridiales RepID=G9YR25_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
obg; GTP-binding protein Obg
L3_079_062G1_scaffold_381_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20363..20647)
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=3 Tax=Clostridiales RepID=G9YR26_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
rpmA; 50S ribosomal protein L27
L3_079_062G1_scaffold_381_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20697..21029)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22151.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G1_scaffold_381_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(21031..21342)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=3 Tax=Clostridiales RepID=G9YR28_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
rplU; 50S ribosomal protein L21
L3_079_062G1_scaffold_381_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21605..22168)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22153.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rubrerythrin
L3_079_062G1_scaffold_381_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22308..23408)
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22154.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
metallophosphoesterase
L3_079_062G1_scaffold_381_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23461..25101)
DNA (1641bp) protein (547aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CM54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22155.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_079_062G1_scaffold_381_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25366..26154)
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YR34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22156.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G1_scaffold_381_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26190..26306)
DNA (117bp) protein (39aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22157.1}; Flags: Fragment;; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Displaying 23 items

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