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L3_079_062G1_scaffold_406

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_406_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1..75)
DNA (75bp) protein (25aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Arginine deiminase n=2 Tax=Collinsella RepID=A4E7H3_9ACTN
L3_079_062G1_scaffold_406_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

587..3034
DNA (2448bp) protein (816aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB21_9ACTN
L3_079_062G1_scaffold_406_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3148..4461
DNA (1314bp) protein (438aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Collinsella sp. CAG:166 RepID=R6A6Z9_9ACTN
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDA36912.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_079_062G1_scaffold_406_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4567..5109
DNA (543bp) protein (181aa)
DJ-1 family protein n=2 Tax=Collinsella RepID=A4E7I2_9ACTN
DJ-1 family protein {ECO:0000313|EMBL:EBA40691.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
DJ-1 family protein
L3_079_062G1_scaffold_406_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5106..5687
DNA (582bp) protein (194aa)
Maf-like protein maf n=2 Tax=Collinsella RepID=A4E7I3_9ACTN
Maf-like protein BN511_00343 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
maf protein
L3_079_062G1_scaffold_406_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5789..6790
DNA (1002bp) protein (334aa)
Peptidase family T4 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZDJ1_9ACTN
Peptidase family T4 {ECO:0000313|EMBL:CDA36930.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
peptidase S58 DmpA
L3_079_062G1_scaffold_406_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7167..8198)
DNA (1032bp) protein (344aa)
Glycosyltransferase group 2 family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZDJ8_9ACTN
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDA36935.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
family 2 glycosyl transferase
L3_079_062G1_scaffold_406_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8191..9393)
DNA (1203bp) protein (401aa)
UDP-galactopyranose mutase {ECO:0000313|EMBL:EBA40695.1}; EC=5.4.99.9 {ECO:0000313|EMBL:EBA40695.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7I6_9ACTN
L3_079_062G1_scaffold_406_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9625..10605
DNA (981bp) protein (327aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:EBA40696.1}; EC=2.3.1.8 {ECO:0000313|EMBL:EBA40696.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Phosphate acetyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7I7_9ACTN
phosphate acetyltransferase
L3_079_062G1_scaffold_406_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10703..11881)
DNA (1179bp) protein (393aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7J3_9ACTN
L3_079_062G1_scaffold_406_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12046..13224)
DNA (1179bp) protein (393aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=2 Tax=root RepID=A4E7J4_9ACTN
L3_079_062G1_scaffold_406_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13346..14506)
DNA (1161bp) protein (387aa)
Transporter major facilitator family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZRF5_9ACTN
Transporter major facilitator family protein {ECO:0000313|EMBL:CDA36946.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
major facilitator superfamily protein
L3_079_062G1_scaffold_406_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14624..15514)
DNA (891bp) protein (297aa)
Transcriptional regulator LysR family n=1 Tax=Collinsella sp. CAG:166 RepID=R6A743_9ACTN
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDA36947.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
LysR; transcriptional regulator
L3_079_062G1_scaffold_406_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15556..15891)
DNA (336bp) protein (112aa)
Histidine triad domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7J8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73842.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
histidine triad (HIT) protein
L3_079_062G1_scaffold_406_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15941..16207)
DNA (267bp) protein (89aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=2 Tax=Collinsella RepID=A4E7J9_9ACTN
L3_079_062G1_scaffold_406_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16250..17701)
DNA (1452bp) protein (484aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB61_9ACTN
L3_079_062G1_scaffold_406_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17817..18521)
DNA (705bp) protein (235aa)
Putative neutral zinc metallopeptidase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZRH4_9ACTN
Putative neutral zinc metallopeptidase {ECO:0000313|EMBL:CDA36966.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
peptidase membrane zinc metallopeptidase
L3_079_062G1_scaffold_406_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18586..19719)
DNA (1134bp) protein (378aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ribonuclease D (EC:3.1.13.5)
Ribonuclease D n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7K3_9ACTN
L3_079_062G1_scaffold_406_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19818..20735
DNA (918bp) protein (306aa)
Diacylglycerol kinase catalytic domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7K4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73837.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
diacylglycerol kinase catalytic subunit
L3_079_062G1_scaffold_406_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20745..20837
DNA (93bp) protein (31aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=A4E7K6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73836.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_062G1_scaffold_406_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21146..22945
DNA (1800bp) protein (600aa)
Gram positive anchor n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZDQ0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73835.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
peptidase U34 dipeptidase
L3_079_062G1_scaffold_406_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23355..23927
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A7D1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA37007.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
Displaying 22 items

View Taxonomy