ggKbase home page

L3_079_062G1_scaffold_428

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_428_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..597)
DNA (597bp) protein (199aa)
Restriction endonuclease S subunit n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIZ8_ALIFI
restriction endonuclease S subunit
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EXZ79586.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_079_062G1_scaffold_428_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(603..2009)
DNA (1407bp) protein (469aa)
Virulence protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIZ9_ALIFI
virulence protein
Virulence RhuM family protein {ECO:0000313|EMBL:EXZ74406.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
L3_079_062G1_scaffold_428_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2017..3570)
DNA (1554bp) protein (518aa)
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EXZ74284.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EXZ74284.1};; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
Type I restriction system adenine methylase HsdM n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ00_ALIFI
type I restriction system adenine methylase HsdM
L3_079_062G1_scaffold_428_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3575..4279)
DNA (705bp) protein (235aa)
T5orf172 domain-containing protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ01_ALIFI
T5orf172 domain-containing protein
Meiotically up-regulated protein 113 family protein {ECO:0000313|EMBL:EXZ79583.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_079_062G1_scaffold_428_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4293..7121)
DNA (2829bp) protein (943aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ02_ALIFI
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:AFL76970.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
HsdR family type I site-specific deoxyribonuclease
L3_079_062G1_scaffold_428_6
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7145..7435)
DNA (291bp) protein (97aa)
Plasmid maintenance system antidote protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ03_ALIFI
plasmid maintenance system antidote protein
Plasmid maintenance system antidote protein {ECO:0000313|EMBL:AFL76971.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_079_062G1_scaffold_428_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7539..8600)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ04_ALIFI
Uncharacterized protein {ECO:0000313|EMBL:EXZ79580.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
hypothetical protein
L3_079_062G1_scaffold_428_8
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8627..10000)
DNA (1374bp) protein (458aa)
Putative ATPase (AAA+ superfamily) n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ05_ALIFI
ATPase (AAA+ superfamily)
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:AFL76973.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_079_062G1_scaffold_428_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10120..10425)
DNA (306bp) protein (102aa)
Helix-turn-helix protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ06_ALIFI
Helix-turn-helix protein
Helix-turn-helix family protein {ECO:0000313|EMBL:EXZ79578.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_079_062G1_scaffold_428_10
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11233..15063
DNA (3831bp) protein (1277aa)
SEC-C motif domain protein n=2 Tax=Bacteroidales RepID=I3YJ07_ALIFI
SEC-C motif domain protein {ECO:0000313|EMBL:AFL76975.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
SEC-C motif domain-containing protein
L3_079_062G1_scaffold_428_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15123..15305
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:EXZ79576.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_079_062G1_scaffold_428_12
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15432..16157
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YJ08_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76976.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_079_062G1_scaffold_428_13
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16666..17778
DNA (1113bp) protein (371aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I8WCC0_9BACE
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EIY35452.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
DNA binding domain, excisionase family
L3_079_062G1_scaffold_428_14
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17871..18977
DNA (1107bp) protein (369aa)
Site-specific recombinase XerD n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6CZF1_9BACE
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK67553.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_079_062G1_scaffold_428_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19086..20135)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CGL9_9PORP
Reverse transcriptase family protein {ECO:0000313|EMBL:KDS53458.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_079_062G1_scaffold_428_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20270..21568)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CLW7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS53457.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_079_062G1_scaffold_428_17
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21851..22351
DNA (501bp) protein (167aa)
Mobilizable transposon, TnpC family protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BEL5_9PORP
Mobilizable transposon, TnpC family protein {ECO:0000313|EMBL:EEC95151.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
mobilizable transposon, TnpC protein
Displaying 17 items

View Taxonomy