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L3_079_062G1_scaffold_581

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_581_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2..613
DNA (612bp) protein (204aa)
Conserved domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB07_9ACTN
Conserved domain protein {ECO:0000313|EMBL:EBA39324.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_062G1_scaffold_581_2
unknown

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610..855
DNA (246bp) protein (82aa)

This feature has no annotations

L3_079_062G1_scaffold_581_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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942..1355
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E771_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40580.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_079_062G1_scaffold_581_4
Enterorhabdus caecimuris, Enterorhabdus, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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1369..1674
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9KXZ1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EOS51091.1}; TaxID=1235794 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Enterorhabdus.;" source="Enterorhabdus caecimuris B7.;"
L3_079_062G1_scaffold_581_5
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1678..2490
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AYM9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ34392.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L3_079_062G1_scaffold_581_6
unknown

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2494..2805
DNA (312bp) protein (104aa)

This feature has no annotations

L3_079_062G1_scaffold_581_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3513..3947
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8L3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40229.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_079_062G1_scaffold_581_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(4012..6087)
DNA (2076bp) protein (692aa)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EBA40234.1}; EC=3.6.3.- {ECO:0000313|EMBL:EBA40234.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Heavy metal translocating P-type ATPase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8L7_9ACTN
heavy metal translocating P-type ATPase
L3_079_062G1_scaffold_581_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(6106..6411)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7M1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35688.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_079_062G1_scaffold_581_10
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6620..7813)
DNA (1194bp) protein (398aa)
Site-specific recombinase, phage integrase family n=2 Tax=Clostridium RepID=E4LQK8_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFR38896.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Site-specific recombinase XerD
L3_079_062G1_scaffold_581_11
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7892..8095)
DNA (204bp) protein (68aa)
Excisionase from transposon Tn916 n=19 Tax=Bacteria RepID=D4MW18_9FIRM
Excisionase from transposon Tn916.
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EOS24589.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L3_079_062G1_scaffold_581_12
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8095..9105)
DNA (1011bp) protein (337aa)
Replication initiation factor n=2 Tax=Firmicutes RepID=E4LQK6_9CLOT
Replication initiation factor {ECO:0000313|EMBL:EFR38902.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Putative phage replication protein RstA
L3_079_062G1_scaffold_581_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9652..10323
DNA (672bp) protein (224aa)
DNA-binding helix-turn-helix protein n=15 Tax=Firmicutes RepID=B6FNH6_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEA82410.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted transcription factor, homolog of eukaryotic MBF1
L3_079_062G1_scaffold_581_14
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10634..11113
DNA (480bp) protein (160aa)
Uncharacterized protein n=17 Tax=Firmicutes RepID=B6FNH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI96648.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Predicted methylated DNA-protein cysteine methyltransferase
L3_079_062G1_scaffold_581_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11337..11627
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FNH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82413.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_079_062G1_scaffold_581_16
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12039..13028
DNA (990bp) protein (330aa)
radical SAM enzyme, Cfr family (EC:2.1.1.-)
23S rRNA m2A2503 methyltransferase {ECO:0000313|EMBL:EDP25442.1}; EC=2.1.1.- {ECO:0000313|EMBL:EDP25442.1};; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
Radical SAM enzyme, Cfr family n=23 Tax=Firmicutes RepID=D4L9F2_9FIRM
Displaying 16 items

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