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L3_079_062G1_scaffold_630

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_630_1
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..268)
DNA (267bp) protein (89aa)
Uncharacterized protein n=8 Tax=Bacteria RepID=G1VJQ3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14551.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_079_062G1_scaffold_630_2
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(270..818)
DNA (549bp) protein (183aa)
Transcriptional activator, adenine-specific DNA methyltransferase (EC:2.1.1.72)
Transcriptional activator, adenine-specific DNA methyltransferase {ECO:0000313|EMBL:CBL14550.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CBL14550.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Transcriptional activator, adenine-specific DNA methyltransferase n=8 Tax=Bacteria RepID=D4L4K5_9FIRM
L3_079_062G1_scaffold_630_3
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(829..1692)
DNA (864bp) protein (288aa)
Uncharacterized protein n=7 Tax=root RepID=H1B4W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32189.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_079_062G1_scaffold_630_4
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1939..3603)
DNA (1665bp) protein (555aa)
Site-specific recombinases, DNA invertase Pin homologs n=9 Tax=root RepID=D6DJL6_CLOSC
Site-specific recombinases, DNA invertase Pin homologs
Uncharacterized protein {ECO:0000313|EMBL:AEN98188.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_079_062G1_scaffold_630_5
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3610..3807)
DNA (198bp) protein (66aa)
Uncharacterized protein n=8 Tax=root RepID=A7VG15_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14548.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_079_062G1_scaffold_630_6
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4050..5342)
DNA (1293bp) protein (431aa)
Predicted P-loop ATPase and inactivated derivatives n=9 Tax=root RepID=D4KA39_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98190.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_079_062G1_scaffold_630_7
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5356..5997)
DNA (642bp) protein (214aa)
DNA primase n=3 Tax=root RepID=G2T4R3_ROSHA
DNA primase
DNA primase {ECO:0000313|EMBL:CDC37589.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
L3_079_062G1_scaffold_630_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6062..7651)
DNA (1590bp) protein (530aa)
Plasmid mobilization system relaxase n=7 Tax=Clostridiales RepID=D4KA38_9FIRM
putative conjugal transfer protein
Plasmid mobilization system relaxase {ECO:0000313|EMBL:CBL01701.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_079_062G1_scaffold_630_9
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7804..8163)
DNA (360bp) protein (120aa)
Uncharacterized protein n=9 Tax=root RepID=A7VG11_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98193.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_079_062G1_scaffold_630_10
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8451..8753)
DNA (303bp) protein (101aa)
Uncharacterized protein n=10 Tax=root RepID=A7VG10_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98194.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_079_062G1_scaffold_630_11
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8750..9082)
DNA (333bp) protein (111aa)
Uncharacterized protein n=13 Tax=root RepID=A7VG09_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK81233.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_079_062G1_scaffold_630_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9083..9268)
DNA (186bp) protein (62aa)
Uncharacterized protein n=10 Tax=Clostridiales RepID=A7VG08_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU98912.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_079_062G1_scaffold_630_13
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9804..10625
DNA (822bp) protein (274aa)
Helix-turn-helix n=10 Tax=Clostridiales RepID=D4JA60_9FIRM
Helix-turn-helix.
Transcriptional regulator, XRE family protein {ECO:0000313|EMBL:AEN98197.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_079_062G1_scaffold_630_14
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11139..11360)
DNA (222bp) protein (74aa)
Uncharacterized protein n=8 Tax=root RepID=C0FQW2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL36774.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
Displaying 14 items

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