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L3_079_062G1_scaffold_701

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_701_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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317..2677
DNA (2361bp) protein (787aa)
Ferrous iron transport protein B n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBY5_9ACTN
Ferrous iron transporter B {ECO:0000313|EMBL:KGI74762.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ferrous iron transport protein B
L3_079_062G1_scaffold_701_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2798..3286
DNA (489bp) protein (163aa)
Transporter, major facilitator family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9G1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74761.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Arabinose efflux permease
L3_079_062G1_scaffold_701_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3273..3893
DNA (621bp) protein (207aa)
Transporter, major facilitator family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9G1_9ACTN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EBA39906.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Arabinose efflux permease
L3_079_062G1_scaffold_701_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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4047..5423
DNA (1377bp) protein (459aa)
Alpha amylase catalytic domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8B9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74760.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Glycosidases
L3_079_062G1_scaffold_701_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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5427..5990
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLI9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74759.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
G:T/U mismatch-specific DNA glycosylase
L3_079_062G1_scaffold_701_6
unknown

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5947..6417
DNA (471bp) protein (157aa)

This feature has no annotations

L3_079_062G1_scaffold_701_7
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6489..8216)
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GJW3_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36125.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_079_062G1_scaffold_701_8
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8297..8599)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GJW4_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36126.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_079_062G1_scaffold_701_9
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8618..9907)
DNA (1290bp) protein (430aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7ANN5_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC58770.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
Plasmid recombination enzyme.
L3_079_062G1_scaffold_701_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10234..10449)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MHN7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33270.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_079_062G1_scaffold_701_11
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10446..10643)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6BD27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA51277.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
L3_079_062G1_scaffold_701_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10849..12222)
DNA (1374bp) protein (458aa)
Phage/plasmid primase, P4 family domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M558_9FIRM
phage/plasmid primase, P4 family, C-terminal domain
Phage/plasmid primase, P4 family, C-terminal domain {ECO:0000313|EMBL:CBL33269.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_079_062G1_scaffold_701_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12197..12817)
DNA (621bp) protein (207aa)
CHC2 zinc finger domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YL29_9FIRM
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EHM55003.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
DNA primase (bacterial type)
L3_079_062G1_scaffold_701_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13039..14142
DNA (1104bp) protein (368aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MHN4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33267.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_079_062G1_scaffold_701_15

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14168..15112
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RMG8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC44729.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Protein of unknown function./Domain of unknown function (DUF1835).
L3_079_062G1_scaffold_701_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15177..15962
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DHB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI80867.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
Displaying 16 items

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