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L3_079_062G1_scaffold_154

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G1_scaffold_154_1
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(92..1363)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:511 RepID=R7PFZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24609.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
transposase IS111A/IS1328/IS1533
L3_079_062G1_scaffold_154_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1690..2466
DNA (777bp) protein (259aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=A8RGT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19383.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_079_062G1_scaffold_154_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2521..9555
DNA (7035bp) protein (2345aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XB79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12586.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Listeria/Bacterioides repeat protein
L3_079_062G1_scaffold_154_4
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9626..11041
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F9K0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96881.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
transcriptional regulator
L3_079_062G1_scaffold_154_5
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11221..11580)
DNA (360bp) protein (120aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RGS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19377.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_079_062G1_scaffold_154_6
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11818..12432
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0A1F7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ49415.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
conserved hypothetical protein TIGR01440
L3_079_062G1_scaffold_154_7
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12429..13430
DNA (1002bp) protein (334aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RGS5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19375.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
sugar ABC transporter periplasmic protein
L3_079_062G1_scaffold_154_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13458..14978
DNA (1521bp) protein (507aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Two-component system sensor histidine kinase n=2 Tax=Clostridium bolteae RepID=R0BAY7_9CLOT
integral membrane sensor signal transduction histidine kinase
L3_079_062G1_scaffold_154_9
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14953..16563
DNA (1611bp) protein (537aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5EVW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96865.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
AraC family transcriptional regulator
L3_079_062G1_scaffold_154_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16606..17667
DNA (1062bp) protein (354aa)
D-xylose ABC transporter, D-xylose-binding protein n=2 Tax=Clostridium bolteae RepID=R0A0Z9_9CLOT
D-xylose ABC transporter, D-xylose-binding protein {ECO:0000313|EMBL:ENZ49411.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
LacI family transcriptional regulator
L3_079_062G1_scaffold_154_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17849..19024
DNA (1176bp) protein (392aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RGR6_9CLOT
Multiple sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ12567.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
ABC transporter substrate-binding protein
L3_079_062G1_scaffold_154_12
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19113..20651
DNA (1539bp) protein (513aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RGR4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96862.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
ABC transporter
L3_079_062G1_scaffold_154_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20655..21827
DNA (1173bp) protein (391aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RGR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19366.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
inner-membrane translocator
L3_079_062G1_scaffold_154_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22041..22679
DNA (639bp) protein (213aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Endonuclease III n=4 Tax=Clostridium bolteae RepID=A8RGR2_9CLOT
DNA-(apurinic or apyrimidinic site) lyase
L3_079_062G1_scaffold_154_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22979..23368
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0A7K0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ32433.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L3_079_062G1_scaffold_154_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23508..23705
DNA (198bp) protein (66aa)
Uncharacterized protein n=5 Tax=Clostridium bolteae RepID=A8RGQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19361.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_079_062G1_scaffold_154_17
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23996..24862
DNA (867bp) protein (289aa)
MerR family transcriptional regulator n=2 Tax=Clostridium RepID=N9XB54_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96857.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
MerR family transcriptional regulator
L3_079_062G1_scaffold_154_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25027..25590
DNA (564bp) protein (188aa)
N-acetyltransferase n=4 Tax=Clostridium RepID=N9XBE8_9CLOT
N-acetyltransferase {ECO:0000313|EMBL:ENZ12560.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
acetyltransferase, ribosomal protein N-acetylase
L3_079_062G1_scaffold_154_19
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25681..26952
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5EVV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96855.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_079_062G1_scaffold_154_20
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26980..27846
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5EZV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96854.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L3_079_062G1_scaffold_154_21
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27986..28318)
DNA (333bp) protein (111aa)
HxlR family transcriptional regulator n=4 Tax=Clostridium RepID=N9YKU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96853.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hxlR-like helix-turn-helix family protein
L3_079_062G1_scaffold_154_22
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28593..29024
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F7W7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96852.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Predicted DNA-binding protein with PD1-like DNA-binding motif
L3_079_062G1_scaffold_154_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29147..29668
DNA (522bp) protein (174aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Peptide deformylase n=4 Tax=Clostridium RepID=N9XB38_9CLOT
N-formylmethionyl-tRNA deformylase
L3_079_062G1_scaffold_154_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29734..30540
DNA (807bp) protein (269aa)
hypothetical protein (EC:2.7.6.5)
Uncharacterized protein n=2 Tax=Clostridium RepID=N9XBD7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12545.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_079_062G1_scaffold_154_25
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30527..31561
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5EZV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96849.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_079_062G1_scaffold_154_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31703..33382
DNA (1680bp) protein (560aa)
malL2; oligo-1,6-glucosidase (EC:3.2.1.10)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YKT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12543.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_079_062G1_scaffold_154_27
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33683..34099
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0A124_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ49381.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
phosphotransferase system, mannose/fructose-specific component IIA
L3_079_062G1_scaffold_154_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34176..34661
DNA (486bp) protein (162aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9XB34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12541.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_079_062G1_scaffold_154_29
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34688..35530
DNA (843bp) protein (281aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9XBD2_9CLOT
PTS system mannose-specific IID component {ECO:0000313|EMBL:CCX96845.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L3_079_062G1_scaffold_154_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35523..36350
DNA (828bp) protein (276aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9YW86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12539.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
PTS system IID component, Man family (TC 4.A.6)
Displaying items 1-30 of 53 in total

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