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L3_079_062G2_scaffold_168

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_168_1
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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52..2544
DNA (2493bp) protein (831aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
DNA gyrase subunit A n=14 Tax=Bacteroides RepID=E1WNR8_BACF6
gyrA; DNA gyrase A subunit
L3_079_062G2_scaffold_168_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2577..3788
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1FSV7_BACFG
putative tetratricopeptide repeat family protein
TPR repeat family protein {ECO:0000313|EMBL:EYE48313.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_079_062G2_scaffold_168_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3929..4096)
DNA (168bp) protein (56aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=I0PYT1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EYE48314.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_079_062G2_scaffold_168_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4145..5266)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=E1WNS0_BACF6
hypothetical protein
Universal stress family protein {ECO:0000313|EMBL:EYB09888.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_079_062G2_scaffold_168_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5345..5629)
DNA (285bp) protein (95aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=Q64TL6_BACFR
putative DNA-binding protein
Putative dNA-binding protein {ECO:0000313|EMBL:EXY74154.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
L3_079_062G2_scaffold_168_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5840..6676)
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LPQ7_9BACE
TPR repeat family protein {ECO:0000313|EMBL:EXZ94301.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
batE; aerotolerance-related exported protein
L3_079_062G2_scaffold_168_7
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6695..8518)
DNA (1824bp) protein (608aa)
BatD family protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JNP8_9BACE
BatD family protein {ECO:0000313|EMBL:EEZ27985.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
batD; aerotolerance-related exported protein
L3_079_062G2_scaffold_168_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8554..9264)
DNA (711bp) protein (237aa)
Aerotolerance-related exported protein n=9 Tax=Bacteroides RepID=E1WNS4_BACF6
batC; aerotolerance-related exported protein
TPR repeat family protein {ECO:0000313|EMBL:EYB09884.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_079_062G2_scaffold_168_9
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9273..10298)
DNA (1026bp) protein (342aa)
Aerotolerance-related membrane protein n=14 Tax=Bacteroides RepID=E1WNS5_BACF6
conserved hypothetical protein BatB
Uncharacterized protein {ECO:0000313|EMBL:CDD42170.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_062G2_scaffold_168_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10312..11295)
DNA (984bp) protein (328aa)
Aerotolerance-related membrane protein n=15 Tax=Bacteroides RepID=E1WNS6_BACF6
batA; aerotolerance-related membrane protein
von Willebrand factor type A domain protein {ECO:0000313|EMBL:EXZ53710.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_079_062G2_scaffold_168_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11347..12420)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6I8Q8_9BACE
putative conserved membrane exported protein
Oxygen tolerance family protein {ECO:0000313|EMBL:EYE44577.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_079_062G2_scaffold_168_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12429..13298)
DNA (870bp) protein (290aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=Q5LCG2_BACFN
hypothetical protein
von Willebrand factor type A domain protein {ECO:0000313|EMBL:EXZ28330.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
L3_079_062G2_scaffold_168_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13355..14350)
DNA (996bp) protein (332aa)
Magnesium chelatase subunit I n=14 Tax=Bacteroides RepID=Q64TK8_BACFR
magnesium chelatase subunit I
AAA domain family protein {ECO:0000313|EMBL:EXZ53713.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_079_062G2_scaffold_168_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14594..16045)
DNA (1452bp) protein (484aa)
Putative integration host factor IHF alpha subunit n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64TK7_BACFR
putative integration host factor IHF alpha subunit
Putative integration host factor IHF alpha subunit {ECO:0000313|EMBL:BAD49172.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_062G2_scaffold_168_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16038..16328)
DNA (291bp) protein (97aa)
DNA-binding protein HU n=13 Tax=Bacteroides RepID=Q64TK6_BACFR
hup2; putative histone-like DNA-binding protein HU2
Bacterial DNA-binding family protein {ECO:0000313|EMBL:EYE48183.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_079_062G2_scaffold_168_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16403..17701)
DNA (1299bp) protein (433aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WP21_BACF6
putative oxidoreductase
L3_079_062G2_scaffold_168_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17698..18657)
DNA (960bp) protein (320aa)
Signal recognition particle receptor FtsY n=13 Tax=Bacteroides RepID=Q5LCF7_BACFN
ftsY; putative recognition particle-docking protein
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
L3_079_062G2_scaffold_168_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18807..18965)
DNA (159bp) protein (53aa)
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I8R5_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE44584.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_079_062G2_scaffold_168_19
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(18985..19173)
DNA (189bp) protein (63aa)
50S ribosomal protein L33 n=70 Tax=Bacteroidales RepID=RL33_BACFN
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1235809 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes JCM 6292.;"
L3_079_062G2_scaffold_168_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(19200..19460)
DNA (261bp) protein (87aa)
50S ribosomal protein L28 n=14 Tax=Bacteroides RepID=RL28_BACFN
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_079_062G2_scaffold_168_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19582..20814)
DNA (1233bp) protein (411aa)
CinA-like protein n=3 Tax=Bacteroides RepID=E1WP25_BACF6
putative competence-damage inducible
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_079_062G2_scaffold_168_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(20822..21841)
DNA (1020bp) protein (340aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=10 Tax=Bacteroides RepID=TSAD_BACFN
putative glycoprotease
L3_079_062G2_scaffold_168_23
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21874..26478
DNA (4605bp) protein (1535aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=I0PYT2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD42155.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
hypothetical protein
L3_079_062G2_scaffold_168_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26574..26954)
DNA (381bp) protein (127aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=Q64TJ7_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKA84932.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_079_062G2_scaffold_168_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(27047..28540)
DNA (1494bp) protein (498aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
Proline--tRNA ligase n=11 Tax=Bacteroides RepID=SYP_BACFN
L3_079_062G2_scaffold_168_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28812..29546)
DNA (735bp) protein (245aa)
TIGR02757 family protein n=2 Tax=Bacteroides fragilis RepID=I8WY79_BACFG
TIGR02757 family protein {ECO:0000313|EMBL:EIY47329.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
hypothetical protein
L3_079_062G2_scaffold_168_27
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29678..32911)
DNA (3234bp) protein (1078aa)
WD40-like protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JNS0_9BACE
WD40-like protein {ECO:0000313|EMBL:EEZ28007.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
putative protease
L3_079_062G2_scaffold_168_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33202..33801
DNA (600bp) protein (200aa)
Cobinamide kinase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64TE5_BACFR
cobinamide kinase
Cobinamide kinase {ECO:0000313|EMBL:BAD49234.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_062G2_scaffold_168_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33824..34861
DNA (1038bp) protein (346aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=5 Tax=Bacteroides RepID=E1WP33_BACF6
putative phosphoribosyltransferase
L3_079_062G2_scaffold_168_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34874..35617
DNA (744bp) protein (248aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
Cobalamin synthase n=3 Tax=Bacteroides RepID=C6I8S8_9BACE
cobalamin 5'-phosphate synthase
Displaying items 1-30 of 64 in total

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