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L3_079_062G2_scaffold_186

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_186_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..93)
DNA (93bp) protein (31aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
DNA gyrase subunit A n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RP65_9BACE
gyrA; DNA gyrase subunit A
L3_079_062G2_scaffold_186_2
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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485..3019
DNA (2535bp) protein (845aa)
Negative regulator of genetic competence n=11 Tax=Bacteroides RepID=E1WNR7_BACF6
clpB; negative regulator of genetic competence
Negative regulator of genetic competence {ECO:0000313|EMBL:CDD42182.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_062G2_scaffold_186_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3150..5195
DNA (2046bp) protein (682aa)
Chaperone protein HtpG n=8 Tax=Bacteroides RepID=HTPG_BACFN
htpG; chaperone protein
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
L3_079_062G2_scaffold_186_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5413..7665
DNA (2253bp) protein (751aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=Q5LCH5_BACFN
Patatin-like phospholipase family protein {ECO:0000313|EMBL:EYE44565.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
hypothetical protein
L3_079_062G2_scaffold_186_5
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8102..8995)
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LPP9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN08245.1}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
hypothetical protein
L3_079_062G2_scaffold_186_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9294..9668
DNA (375bp) protein (125aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q5LCH7_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY96690.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_079_062G2_scaffold_186_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9764..10390
DNA (627bp) protein (209aa)
Chloramphenicol acetyltransferase (CAT-III) n=6 Tax=Bacteroides RepID=Q64TM5_BACFR
chloramphenicol acetyltransferase (CAT-III)
Chloramphenicol acetyltransferase family protein {ECO:0000313|EMBL:EYE41377.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_079_062G2_scaffold_186_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10542..11435)
DNA (894bp) protein (298aa)
dapA2; putative dihydrodipicolinate synthase (EC:4.3.3.7)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
4-hydroxy-tetrahydrodipicolinate synthase n=11 Tax=Bacteroides RepID=E1WNR1_BACF6
L3_079_062G2_scaffold_186_9
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11539..13536)
DNA (1998bp) protein (666aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
DNA ligase n=2 Tax=Bacteroides RepID=C6I8P1_9BACE
DNA ligase
L3_079_062G2_scaffold_186_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13613..14290
DNA (678bp) protein (226aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
tRNA (guanine-N(1)-)-methyltransferase n=12 Tax=Bacteroides RepID=E1WNQ9_BACF6
trmD; putative tRNA (guanine-N(1)-)-methyltransferase
L3_079_062G2_scaffold_186_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14508..15419)
DNA (912bp) protein (304aa)
pyrD1; putative dihydroorotate dehydrogenase, catalytic subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit n=10 Tax=Bacteroides RepID=PYRDB_BACFN
L3_079_062G2_scaffold_186_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15407..16183)
DNA (777bp) protein (259aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=2 Tax=Bacteroides RepID=E1WNQ7_BACF6
pyrK; putative dihydroorotate dehydrogenase electron transfer subunit
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_062G2_scaffold_186_13
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16180..16293)
DNA (114bp) protein (38aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=I0PYT0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD42192.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_062G2_scaffold_186_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16256..16711)
DNA (456bp) protein (152aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8X1J5_BACFG
putative DNA-binding protein
Helix-turn-helix family protein {ECO:0000313|EMBL:EYE48461.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_079_062G2_scaffold_186_15
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17172..17324
DNA (153bp) protein (51aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LPN8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN08234.1}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
hypothetical protein
L3_079_062G2_scaffold_186_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17916..18935)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q5LCI5_BACFN
hypothetical protein
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EIY47286.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_079_062G2_scaffold_186_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18954..19730)
DNA (777bp) protein (259aa)
AMP nucleosidase n=14 Tax=Bacteroides RepID=Q64TN5_BACFR
putative AMP nucleosidase
Uncharacterized protein {ECO:0000313|EMBL:EKA84970.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_079_062G2_scaffold_186_18
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19795..20244
DNA (450bp) protein (150aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q5LCI7_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEZ27963.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_079_062G2_scaffold_186_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20589..22511)
DNA (1923bp) protein (641aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=4 Tax=Bacteroides RepID=I3HY40_BACFG
putative cation efflux pump
RND transporter, hydrophobe/amphiphile efflux-1 family protein {ECO:0000313|EMBL:EXY27349.1}; TaxID=1339284 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T10.;"
L3_079_062G2_scaffold_186_20
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22480..23661)
DNA (1182bp) protein (394aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=2 Tax=Bacteroides fragilis RepID=I8WZD9_BACFG
putative drug resistance transport-related membrane protein
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:CDD42198.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_062G2_scaffold_186_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23666..24805)
DNA (1140bp) protein (380aa)
Putative cation efflux pump n=2 Tax=Bacteroides RepID=Q64TN8_BACFR
putative cation efflux pump
Putative cation efflux pump {ECO:0000313|EMBL:BAD49141.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_062G2_scaffold_186_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24824..26230)
DNA (1407bp) protein (469aa)
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein n=2 Tax=Bacteroides RepID=C6I8M9_9BACE
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein {ECO:0000313|EMBL:EYE48544.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
putative outer membrane exported protein
L3_079_062G2_scaffold_186_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26467..27291)
DNA (825bp) protein (275aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=E1WNP9_BACF6
hypothetical protein
Putative zinc ribbon domain protein {ECO:0000313|EMBL:EYA19509.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
L3_079_062G2_scaffold_186_24
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27297..28493)
DNA (1197bp) protein (399aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LPM9_9BACE
hypothetical protein
L3_079_062G2_scaffold_186_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28498..28911
DNA (414bp) protein (138aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=Q5LCJ3_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ94273.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
L3_079_062G2_scaffold_186_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28904..29287)
DNA (384bp) protein (128aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=Q64TP3_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKA84979.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_079_062G2_scaffold_186_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29378..29650)
DNA (273bp) protein (91aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6I8M4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKA84980.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
hypothetical protein
L3_079_062G2_scaffold_186_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29658..30452)
DNA (795bp) protein (265aa)
TIGR00245 family protein n=11 Tax=Bacteroides RepID=I3HY48_BACFG
putative ABC transport system, membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ44414.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L3_079_062G2_scaffold_186_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30456..31076)
DNA (621bp) protein (207aa)
ABC transporter ATP-binding protein n=7 Tax=Bacteroides RepID=Q64TP6_BACFR
putative ABC transporter ATP-binding protein
ABC transporter family protein {ECO:0000313|EMBL:EYE48618.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_079_062G2_scaffold_186_30
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31171..31698
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LPM3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN08219.1}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
hypothetical protein
Displaying items 1-30 of 83 in total

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