ggKbase home page

L3_079_062G2_scaffold_192

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_192_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

173..496
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L7F3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR41617.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_062G2_scaffold_192_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

490..894
DNA (405bp) protein (135aa)
Putative toxin-antitoxin system, antitoxin component n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3S5_BACVU
Putative toxin-antitoxin system, antitoxin component {ECO:0000313|EMBL:EFG19498.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_079_062G2_scaffold_192_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1161..3524
DNA (2364bp) protein (788aa)
Putative helicase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L7F1_BACV8
Putative helicase {ECO:0000313|EMBL:ABR41615.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
helicase
L3_079_062G2_scaffold_192_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3630..3875)
DNA (246bp) protein (82aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L5Y0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS01662.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_062G2_scaffold_192_5
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3877..4617)
DNA (741bp) protein (247aa)
Probable transcriptional regulatory protein BVU_3469 n=13 Tax=Bacteroides RepID=Y3469_BACV8
transcriptional regulator
Probable transcriptional regulatory protein BN728_02130 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_062G2_scaffold_192_6
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4651..7113)
DNA (2463bp) protein (821aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Phenylalanine--tRNA ligase beta subunit n=5 Tax=Bacteroides RepID=A6L5X8_BACV8
L3_079_062G2_scaffold_192_7
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7267..8823)
DNA (1557bp) protein (519aa)
Replicative DNA helicase {ECO:0000313|EMBL:EEO46336.1}; EC=3.6.1.- {ECO:0000313|EMBL:EEO46336.1};; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
DNA helicase n=9 Tax=Bacteroides RepID=A6L5X7_BACV8
DNA helicase
L3_079_062G2_scaffold_192_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9085..9912
DNA (828bp) protein (276aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4V7_BACVU
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L3_079_062G2_scaffold_192_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9987..12866)
DNA (2880bp) protein (960aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4V8_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG19075.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_079_062G2_scaffold_192_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12866..16042)
DNA (3177bp) protein (1059aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
UvrD/REP helicase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4V9_BACVU
ATP-dependent helicase
L3_079_062G2_scaffold_192_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16123..17424)
DNA (1302bp) protein (434aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Sensor histidine kinase/response regulator n=2 Tax=Bacteroides vulgatus RepID=D4V4W0_BACVU
two-component system sensor histidine kinase
L3_079_062G2_scaffold_192_12
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17540..18880)
DNA (1341bp) protein (447aa)
Response regulator receiver domain protein n=4 Tax=Bacteroides RepID=D4V4W1_BACVU
Putative fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein {ECO:0000313|EMBL:EET14942.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
two-component system response regulator
L3_079_062G2_scaffold_192_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18917..20689)
DNA (1773bp) protein (591aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4W2_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG19079.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_079_062G2_scaffold_192_14
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20693..20893)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=G1UMD1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX27588.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_079_062G2_scaffold_192_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20899..21438
DNA (540bp) protein (180aa)
Glutathione peroxidase n=3 Tax=Bacteroides vulgatus RepID=A6L5X0_BACV8
glutathione peroxidase
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_079_062G2_scaffold_192_16
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21469..21696)
DNA (228bp) protein (76aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6Z236_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS10324.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
hypothetical protein
L3_079_062G2_scaffold_192_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21693..22166)
DNA (474bp) protein (158aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=A6L5W9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS01673.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_062G2_scaffold_192_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22163..22591)
DNA (429bp) protein (143aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L5W8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY74871.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_062G2_scaffold_192_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22902..23318
DNA (417bp) protein (139aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L5W7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS01675.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_062G2_scaffold_192_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23685..24161)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L5W5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR41079.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_062G2_scaffold_192_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24311..24859
DNA (549bp) protein (183aa)
Transcription termination/antitermination factor NusG n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4W8_BACVU
Transcription termination/antitermination factor NusG {ECO:0000313|EMBL:EFG19085.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
transcriptional regulator UpxY-like protein
L3_079_062G2_scaffold_192_22
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24940..25323
DNA (384bp) protein (128aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3Q258_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO61657.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
hypothetical protein
L3_079_062G2_scaffold_192_23
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25957..27324
DNA (1368bp) protein (456aa)
Polysaccharide biosynthesis protein n=3 Tax=Bacteroides RepID=C6Z244_9BACE
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EET14953.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
flippase
L3_079_062G2_scaffold_192_24
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27338..28153
DNA (816bp) protein (272aa)
Glycosyltransferase, group 2 family protein n=4 Tax=Bacteroides RepID=D4V4X2_BACVU
Glycosyltransferase family 2 {ECO:0000313|EMBL:EFV68135.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
glycosyl transferase family protein
L3_079_062G2_scaffold_192_25
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28161..28952
DNA (792bp) protein (264aa)
Glycosyltransferase, family 11 n=6 Tax=Bacteroides RepID=C3RB99_9BACE
Alpha-1,2-fucosyltransferase {ECO:0000313|EMBL:EFV68134.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L3_079_062G2_scaffold_192_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28964..30223
DNA (1260bp) protein (420aa)
Putative membrane protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4X4_BACVU
Putative membrane protein {ECO:0000313|EMBL:EFG19091.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L3_079_062G2_scaffold_192_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30223..31098
DNA (876bp) protein (292aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFG19092.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFG19092.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4X5_BACVU
glycosyl transferase, group 2 family protein
L3_079_062G2_scaffold_192_28
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31098..32207
DNA (1110bp) protein (370aa)
Glycosyltransferase, group 1 family protein n=4 Tax=Bacteroides RepID=C6Z265_9BACE
Glycosyltransferase {ECO:0000313|EMBL:EFV68131.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
glycoside transferase family 4
L3_079_062G2_scaffold_192_29
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32260..32778
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3RB95_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY41696.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
hypothetical protein
L3_079_062G2_scaffold_192_30
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32759..33274
DNA (516bp) protein (172aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6Z267_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV68130.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
Displaying items 1-30 of 59 in total

View Taxonomy