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L3_079_062G2_scaffold_235

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_235_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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129..683
DNA (555bp) protein (185aa)
Hydrolase, NUDIX family n=3 Tax=Bacteroides vulgatus RepID=D4VBH4_BACVU
Nudix/MutT family protein
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFG16783.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L3_079_062G2_scaffold_235_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(790..1578)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HC41_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS01484.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_079_062G2_scaffold_235_3
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1850..2305)
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9U0M7_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOA56325.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
acetyltransferase
L3_079_062G2_scaffold_235_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2360..3319)
DNA (960bp) protein (320aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Beta-lactamase n=5 Tax=root RepID=E5URB2_9BACE
beta-lactamase
L3_079_062G2_scaffold_235_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3378..5165)
DNA (1788bp) protein (596aa)
Glycosyl hydrolase, family 15 n=3 Tax=Bacteroides RepID=C6Z2P7_9BACE
Glycosyl hydrolases 15 family protein {ECO:0000313|EMBL:KDS53660.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
glycoside hydrolase
L3_079_062G2_scaffold_235_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5184..7436)
DNA (2253bp) protein (751aa)
Glycosyltransferase family 20, candidate bifunctional trehalose-6-phosphate synthase/trehalose-6-phosphate phosphatase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L5C4_BACV8
Glycosyltransferase family 20, candidate bifunctional trehalose-6-phosphate synthase/trehalose-6-phosphate phosphatase {ECO:0000313|EMBL:ABR40888.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
bifunctional trehalose-6-phosphate synthase/HAD hydrolase
L3_079_062G2_scaffold_235_7
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7797..9143
DNA (1347bp) protein (449aa)
Aspartate kinase {ECO:0000313|EMBL:EET15154.1}; EC=2.7.2.4 {ECO:0000313|EMBL:EET15154.1};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Aspartate kinase n=2 Tax=Bacteroides RepID=C6Z2P5_9BACE
lysine-sensitive aspartokinase III
L3_079_062G2_scaffold_235_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9455..10090
DNA (636bp) protein (212aa)
Chloramphenicol acetyltransferase n=4 Tax=Bacteroides RepID=E5URB6_9BACE
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:EOS01478.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
chloramphenicol acetyltransferase
L3_079_062G2_scaffold_235_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10128..10817
DNA (690bp) protein (230aa)
Haloacid dehalogenase-like hydrolase n=5 Tax=Bacteroides RepID=D4V6J9_BACVU
haloacid dehalogenase-like family hydrolase
Uncharacterized protein {ECO:0000313|EMBL:EOS01477.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_062G2_scaffold_235_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11086..11787)
DNA (702bp) protein (234aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L5C9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY75321.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_062G2_scaffold_235_11
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11917..12030)
DNA (114bp) protein (38aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=G1ULL0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF18085.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_062G2_scaffold_235_12
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12061..12630)
DNA (570bp) protein (190aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Potassium-transporting ATPase C chain n=3 Tax=Bacteroides RepID=C6Z2P0_9BACE
potassium-transporting ATPase subunit C
L3_079_062G2_scaffold_235_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12644..14677)
DNA (2034bp) protein (678aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Potassium-transporting ATPase B chain n=5 Tax=root RepID=A6L5D1_BACV8
potassium-transporting ATPase B chain
L3_079_062G2_scaffold_235_14
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14711..16417)
DNA (1707bp) protein (569aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=10 Tax=root RepID=ATKA_BACV8
L3_079_062G2_scaffold_235_15
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16547..16645)
DNA (99bp) protein (33aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=G1UME6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX27574.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_079_062G2_scaffold_235_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16792..17418
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9TZU8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY75326.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
phosphatase
L3_079_062G2_scaffold_235_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17808..19145)
DNA (1338bp) protein (446aa)
Two-component system response regulator n=4 Tax=Bacteroides vulgatus RepID=A6L5D4_BACV8
two-component system response regulator
Uncharacterized protein {ECO:0000313|EMBL:EOS01469.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_062G2_scaffold_235_18
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19447..20673
DNA (1227bp) protein (409aa)
Glycine betaine/L-proline transport ATP-binding protein proV n=3 Tax=Bacteroides RepID=C6Z2N5_9BACE
Glycine betaine transport ATP-binding protein {ECO:0000313|EMBL:EFV68266.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
glycine betaine transport ATP-binding protein
L3_079_062G2_scaffold_235_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20670..21494
DNA (825bp) protein (275aa)
Glycine betaine/L-proline transport system permease n=5 Tax=Bacteroides RepID=A6L5D6_BACV8
glycine betaine/L-proline transport system permease
Glycine betaine/proline transport system permease {ECO:0000313|EMBL:EOS01467.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_062G2_scaffold_235_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21497..22339
DNA (843bp) protein (281aa)
Glycine betaine-binding protein n=2 Tax=Bacteroides vulgatus RepID=A6L5D7_BACV8
glycine betaine-binding protein
Substrate binding domain of ABC-type glycine betaine transport system family protein {ECO:0000313|EMBL:KDS53646.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_062G2_scaffold_235_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22484..23392
DNA (909bp) protein (303aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L5D8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS01465.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_062G2_scaffold_235_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23405..23956
DNA (552bp) protein (184aa)
Maltose O-acetyltransferase n=2 Tax=Bacteroides vulgatus RepID=R9HC19_BACVU
maltose O-acetyltransferase
Maltose O-acetyltransferase {ECO:0000313|EMBL:EOS01464.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_062G2_scaffold_235_23
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24016..24234)
DNA (219bp) protein (73aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=A6L5E0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF18073.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_062G2_scaffold_235_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24466..25320
DNA (855bp) protein (285aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Methionine aminopeptidase n=3 Tax=Bacteroides RepID=C6Z2M9_9BACE
methionine aminopeptidase A
L3_079_062G2_scaffold_235_25
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


25344..26363
DNA (1020bp) protein (340aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=7 Tax=root RepID=TSAD_BACV8
DNA-binding/iron metalloprotein/AP endonuclease
L3_079_062G2_scaffold_235_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26385..26885
DNA (501bp) protein (167aa)
Competence-damage inducible protein n=7 Tax=root RepID=A6L5E3_BACV8
competence-damage inducible protein
Competence/damage-inducible protein CinA domain {ECO:0000313|EMBL:EOS01460.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_062G2_scaffold_235_27
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


26990..27250
DNA (261bp) protein (87aa)
50S ribosomal protein L28 n=16 Tax=Bacteroides RepID=RL28_BACV8
50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_079_062G2_scaffold_235_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


27271..27459
DNA (189bp) protein (63aa)
50S ribosomal protein L33 n=24 Tax=root RepID=RL33_BACV8
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L3_079_062G2_scaffold_235_29
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27469..27624
DNA (156bp) protein (52aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=F0R009_BACSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV68277.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_079_062G2_scaffold_235_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27798..28757
DNA (960bp) protein (320aa)
Signal recognition particle receptor FtsY n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V6L9_BACVU
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
recognition particle-docking protein FtsY
Displaying items 1-30 of 49 in total

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