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L3_079_062G2_scaffold_238

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_238_1
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(95..1336)
DNA (1242bp) protein (414aa)
TonB-dependent receptor plug domain protein n=4 Tax=Bacteroides RepID=C3PVY2_9BACE
hypothetical protein
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:EEO59481.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L3_079_062G2_scaffold_238_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1380..1571)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I8WLL5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS29307.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_079_062G2_scaffold_238_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1709..2839)
DNA (1131bp) protein (377aa)
Coproporphyrinogen III oxidase n=2 Tax=Bacteroides vulgatus RepID=A6KWE2_BACV8
coproporphyrinogen III oxidase
Radical SAM superfamily protein {ECO:0000313|EMBL:KDS29306.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_079_062G2_scaffold_238_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2846..2992)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZRN4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS29305.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_079_062G2_scaffold_238_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3025..5184
DNA (2160bp) protein (720aa)
Translation elongation factor G n=4 Tax=Bacteroides RepID=R9HSQ9_BACVU
fusA; elongation factor G
Putative translation elongation factor G {ECO:0000313|EMBL:EFG18553.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L3_079_062G2_scaffold_238_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5417..7015
DNA (1599bp) protein (533aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Sensor protein rprX n=8 Tax=Bacteroides RepID=I8VSL5_9BACE
histidine kinase
L3_079_062G2_scaffold_238_7
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7017..7715
DNA (699bp) protein (233aa)
Two-component system response regulator n=17 Tax=Bacteroides RepID=A6KWD9_BACV8
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:CDF19795.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_062G2_scaffold_238_8
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7791..7973)
DNA (183bp) protein (61aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=C3PVX7_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF19794.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_062G2_scaffold_238_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8082..8528)
DNA (447bp) protein (149aa)
Transcriptional regulator n=14 Tax=Bacteroides RepID=A6KWD8_BACV8
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EOS04221.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_062G2_scaffold_238_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


8738..9082
DNA (345bp) protein (115aa)
30S ribosomal protein S6 n=7 Tax=Bacteroides RepID=RS6_BACV8
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_062G2_scaffold_238_11
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


9085..9354
DNA (270bp) protein (90aa)
30S ribosomal protein S18 n=25 Tax=root RepID=RS18_BACV8
30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
L3_079_062G2_scaffold_238_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


9370..9813
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=7 Tax=Bacteroides RepID=RL9_BACV8
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_062G2_scaffold_238_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9883..10575)
DNA (693bp) protein (231aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KWD4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04217.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_062G2_scaffold_238_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10730..10930)
DNA (201bp) protein (67aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6Z0W2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY77753.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_079_062G2_scaffold_238_15
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11091..12764)
DNA (1674bp) protein (558aa)
Long-chain-fatty-acid-CoA ligase n=7 Tax=Bacteroides RepID=E5UWH3_9BACE
long-chain-fatty-acid-CoA ligase
Long-chain-fatty-acid-CoA ligase {ECO:0000313|EMBL:CDF17797.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_062G2_scaffold_238_16
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12870..14186
DNA (1317bp) protein (439aa)
tRNA methylthiotransferase YqeV n=7 Tax=Bacteroides RepID=C6Z0W4_9BACE
Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:CDF17796.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_062G2_scaffold_238_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14222..15247
DNA (1026bp) protein (342aa)
Glycosyltransferase family 2 n=2 Tax=Bacteroides vulgatus RepID=A6KWD1_BACV8
glycosyl transferase family protein
Glycosyltransferase family 2 {ECO:0000313|EMBL:ABR37737.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_062G2_scaffold_238_18
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15335..16216
DNA (882bp) protein (294aa)
Radical SAM domain protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NWM5_9BACE
Radical SAM domain protein {ECO:0000313|EMBL:CDF17794.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
DNA repair photolyase
L3_079_062G2_scaffold_238_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16363..16716)
DNA (354bp) protein (118aa)
Dihydroneopterin aldolase n=6 Tax=Bacteroides RepID=A6KWC9_BACV8
dihydroneopterin aldolase
Dihydroneopterin aldolase {ECO:0000313|EMBL:EIY77758.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_062G2_scaffold_238_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16860..19865
DNA (3006bp) protein (1002aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VBF2_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG16806.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_079_062G2_scaffold_238_21
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19958..22504)
DNA (2547bp) protein (849aa)
Ribonucleoside-diphosphate reductase n=3 Tax=Bacteroides RepID=D4V4E7_BACVU
Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:CDF17791.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
ribonucleoside reductase
L3_079_062G2_scaffold_238_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22848..23588
DNA (741bp) protein (247aa)
Nitroreductase family protein n=5 Tax=Bacteroides RepID=C6Z0X0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY77761.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
oxidoreductase
L3_079_062G2_scaffold_238_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23673..25079)
DNA (1407bp) protein (469aa)
Chromosomal replication initiator protein DnaA n=6 Tax=Bacteroides RepID=A6KWC5_BACV8
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
dnaA; chromosomal replication initiation protein
L3_079_062G2_scaffold_238_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25417..26304)
DNA (888bp) protein (296aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L7Y1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR41795.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_062G2_scaffold_238_25
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26324..27553)
DNA (1230bp) protein (410aa)
N-acetylmuramoyl-L-alanine amidase n=3 Tax=Bacteroides RepID=C6Z0X3_9BACE
N-acetylmuramoyl-L-alanine amidase amiA {ECO:0000313|EMBL:EFV66503.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
N-acetylmuramoyl-L-alanine amidase amiA
L3_079_062G2_scaffold_238_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27710..28666
DNA (957bp) protein (319aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z0X4_9BACE
sodium-dependent transporter
Putative sodium-dependent transporter {ECO:0000313|EMBL:ABR41793.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_062G2_scaffold_238_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28849..29076
DNA (228bp) protein (76aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=G1UMN2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS54540.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_062G2_scaffold_238_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29593..31770
DNA (2178bp) protein (726aa)
TonB-dependent outer membrane receptor n=5 Tax=Bacteroides RepID=A6L7X6_BACV8
TonB-dependent Receptor Plug domain protein {ECO:0000313|EMBL:KDS32489.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
TonB-dependent outer membrane receptor
L3_079_062G2_scaffold_238_29
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31933..32040)
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=G1UMN1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX27494.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_079_062G2_scaffold_238_30
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32019..33065)
DNA (1047bp) protein (349aa)
Arsenical-resistance protein n=3 Tax=Bacteroides RepID=C6Z0X8_9BACE
Symporter {ECO:0000313|EMBL:EFV66507.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
symporter, arsenic resistance membrane protein
Displaying items 1-30 of 52 in total

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