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L3_079_062G2_scaffold_325

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_325_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..2206)
DNA (2205bp) protein (735aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45272.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative tail fiber protein (GpH)
L3_079_062G2_scaffold_325_2
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(2211..2834)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H6W3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29291.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_079_062G2_scaffold_325_3
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(2827..4050)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GXS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29290.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Uncharacterized homolog of phage Mu protein gp47
L3_079_062G2_scaffold_325_4
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(4050..4460)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H5U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29289.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
phage protein
L3_079_062G2_scaffold_325_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4460..4879)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34475.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G2_scaffold_325_6
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(4869..5795)
DNA (927bp) protein (309aa)
Putative phage cell wall hydrolase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HTP9_9FIRM
Putative phage cell wall hydrolase {ECO:0000313|EMBL:CDB29287.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
phage integrase SAM domain-containing protein
L3_079_062G2_scaffold_325_7
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(5831..6475)
DNA (645bp) protein (215aa)
Putative LysM domain protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H6W0_9FIRM
Putative LysM domain protein {ECO:0000313|EMBL:CDB29286.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
LysM domain.
L3_079_062G2_scaffold_325_8
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(6472..8592)
DNA (2121bp) protein (707aa)
Tape measure domain-containing protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GXS0_9FIRM
Tape measure domain-containing protein {ECO:0000313|EMBL:CDB29285.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
phage tape measure protein
L3_079_062G2_scaffold_325_9
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8655..9140)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y2M9_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ88292.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
hypothetical protein
L3_079_062G2_scaffold_325_10
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9407..9832)
DNA (426bp) protein (142aa)
Phage XkdN-like protein n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0R4L1_9FIRM
Phage XkdN-like protein {ECO:0000313|EMBL:EIC94619.1}; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum F0468.;"
XkdN-like protein
L3_079_062G2_scaffold_325_11
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9850..10320)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00037953EB
Phage protein {ECO:0000313|EMBL:CDE11506.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hypothetical protein
L3_079_062G2_scaffold_325_12
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10335..11660)
DNA (1326bp) protein (442aa)
Phage tail sheath protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0Z2_9FIRM
Phage tail sheath protein.
Phage tail sheath protein {ECO:0000313|EMBL:CBL24904.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_079_062G2_scaffold_325_13
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11662..11850)
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0Z3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL24905.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_079_062G2_scaffold_325_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11853..12275)
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2C695_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI62891.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_079_062G2_scaffold_325_15
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12268..12765)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JK37_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ84452.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_079_062G2_scaffold_325_16
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(12765..13136)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6M2I6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB93873.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_079_062G2_scaffold_325_17
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13130..13525)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6QBG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC19237.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
L3_079_062G2_scaffold_325_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13531..14703)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2AS06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34463.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
phage capsid protein
L3_079_062G2_scaffold_325_19
unknown

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comp(14711..15073)
DNA (363bp) protein (121aa)

This feature has no annotations

L3_079_062G2_scaffold_325_20
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15085..15738)
DNA (654bp) protein (218aa)
Phage minor structural protein GP20 n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAI7_9CLOT
Phage minor structural protein GP20 {ECO:0000313|EMBL:EEG51703.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Phage minor structural protein GP20.
L3_079_062G2_scaffold_325_21
unknown

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comp(15735..15896)
DNA (162bp) protein (54aa)

This feature has no annotations

L3_079_062G2_scaffold_325_22
unknown

Not on your lists

comp(15893..16093)
DNA (201bp) protein (67aa)

This feature has no annotations

L3_079_062G2_scaffold_325_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16090..17658)
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI0003633946
phage head morphogenesis protein
SPP1 gp7 family Head morphogeneis protein {ECO:0000313|EMBL:EGA93781.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_079_062G2_scaffold_325_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17705..19225)
DNA (1521bp) protein (507aa)
Phage portal protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GN62_CLOSY
Phage portal protein {ECO:0000313|EMBL:EGA93782.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
phage portal protein
L3_079_062G2_scaffold_325_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19219..19404)
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34458.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G2_scaffold_325_26
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19413..20657)
DNA (1245bp) protein (415aa)
Putative terminase large subunit n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L0H3_OSCVS
putative terminase large subunit
Putative terminase large subunit {ECO:0000313|EMBL:BAK99001.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_079_062G2_scaffold_325_27
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20635..21138)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DD76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD87858.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
L3_079_062G2_scaffold_325_28
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21174..21911)
DNA (738bp) protein (246aa)
Formyl transferase domain protein n=3 Tax=environmental samples RepID=R6YTJ0_9CLOT
Formyl transferase domain protein {ECO:0000313|EMBL:CDD37205.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
methionyl-tRNA formyltransferase
L3_079_062G2_scaffold_325_29
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21908..23047)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=3 Tax=environmental samples RepID=R6Z0V3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE15027.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
hypothetical protein
L3_079_062G2_scaffold_325_30
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

comp(23044..23580)
DNA (537bp) protein (179aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AIZ8_9FIRM
hypothetical protein
Displaying items 1-30 of 52 in total

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