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L3_079_062G2_scaffold_329

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_329_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..133)
DNA (132bp) protein (44aa)
Uncharacterized protein (Fragment) n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YKJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM55495.1}; Flags: Fragment;; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Protein of unknown function DUF2088
L3_079_062G2_scaffold_329_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(117..1265)
DNA (1149bp) protein (383aa)
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27191.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G2_scaffold_329_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1280..2758)
DNA (1479bp) protein (493aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27192.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G2_scaffold_329_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2774..3250)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27193.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G2_scaffold_329_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3345..4325)
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27194.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G2_scaffold_329_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4373..5419)
DNA (1047bp) protein (349aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
uxuA; mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=2 Tax=Clostridiales RepID=H1CJI5_9FIRM
L3_079_062G2_scaffold_329_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5416..6321)
DNA (906bp) protein (302aa)
Dihydrodipicolinate synthetase family protein n=2 Tax=Clostridiales RepID=G9YMI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27196.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
dihydrodipicolinate synthetase
L3_079_062G2_scaffold_329_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6354..8045)
DNA (1692bp) protein (564aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJI7_9FIRM
L3_079_062G2_scaffold_329_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8042..8872)
DNA (831bp) protein (277aa)
Transcriptional regulator, IclR family protein n=3 Tax=Clostridiales RepID=G9YMI8_9FIRM
Transcriptional regulator, IclR family protein {ECO:0000313|EMBL:ERI76688.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
IclR family transcriptional regulator
L3_079_062G2_scaffold_329_10
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9018..9332
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D5C1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI76687.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_079_062G2_scaffold_329_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9339..10355
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27199.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
LacI family transcriptional regulator
L3_079_062G2_scaffold_329_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10392..11417
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27200.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
LacI family transcriptional regulator
L3_079_062G2_scaffold_329_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11496..13007
DNA (1512bp) protein (504aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CJJ1_9FIRM
Putative sugar ABC transporter, ATP binding protein {ECO:0000313|EMBL:ERI76684.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC transporter
L3_079_062G2_scaffold_329_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13013..14062
DNA (1050bp) protein (350aa)
Putative ribose ABC transporter permease protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BY18_9CLOT
Putative ribose ABC transporter permease protein {ECO:0000313|EMBL:ERI76683.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type transporter, integral membrane subunit
L3_079_062G2_scaffold_329_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14082..15122
DNA (1041bp) protein (347aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Clostridiales RepID=U2D5A7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO27203.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
oxidoreductase domain containing protein
L3_079_062G2_scaffold_329_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15142..16056
DNA (915bp) protein (305aa)
AP endonuclease, family 2 n=3 Tax=Clostridiales RepID=G9YMJ6_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:EHM54074.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
xylose isomerase domain-containing protein TIM barrel
L3_079_062G2_scaffold_329_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16107..16919
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27205.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
AMP-dependent synthetase and ligase
L3_079_062G2_scaffold_329_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16930..17913
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27206.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
oxidoreductase domain protein
L3_079_062G2_scaffold_329_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18176..18934)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27207.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
GntR family transcriptional regulator
L3_079_062G2_scaffold_329_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19030..20469)
DNA (1440bp) protein (480aa)
succinate CoA transferase (EC:3.1.2.1)
Succinate CoA transferase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJJ8_9FIRM
Succinate CoA transferase {ECO:0000313|EMBL:EHO27208.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G2_scaffold_329_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20578..21777)
DNA (1200bp) protein (400aa)
Acetyl-CoA C-acetyltransferase (Fragment) n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54032.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
acetyl-CoA acetyltransferase
L3_079_062G2_scaffold_329_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21800..22969)
DNA (1170bp) protein (390aa)
Malate dehydrogenase (oxaloacetate-decarboxylating) (EC:1.1.1.38)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27210.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G2_scaffold_329_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23000..24364)
DNA (1365bp) protein (455aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
class II fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJK1_9FIRM
L3_079_062G2_scaffold_329_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24393..24983)
DNA (591bp) protein (197aa)
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=3 Tax=Clostridiales RepID=G9YLK3_9FIRM
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:ERI61343.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_079_062G2_scaffold_329_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25017..25901)
DNA (885bp) protein (295aa)
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type n=2 Tax=Clostridiales RepID=G9YLK4_9FIRM
Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type {ECO:0000313|EMBL:EHO27213.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha
L3_079_062G2_scaffold_329_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25968..27326)
DNA (1359bp) protein (453aa)
MmgE/PrpD family protein n=2 Tax=Clostridiales RepID=U2AML7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO27214.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
MmgE/PrpD family protein
L3_079_062G2_scaffold_329_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27727..28590
DNA (864bp) protein (288aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YLK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27215.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G2_scaffold_329_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28617..29816
DNA (1200bp) protein (400aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27216.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
class I and II aminotransferase
L3_079_062G2_scaffold_329_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29859..30707
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YLK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27217.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G2_scaffold_329_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30743..32617
DNA (1875bp) protein (625aa)
TRAP transporter, 4TM/12TM fusion protein n=3 Tax=Clostridiales RepID=G9YLK9_9FIRM
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:EHO27218.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
TRAP transporter, 4TM/12TM fusion protein
Displaying items 1-30 of 33 in total

View Taxonomy