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L3_079_062G2_scaffold_420

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_420_1
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1286)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Escherichia coli DEC12C RepID=H5JMR3_ECOLX
YqeB family selenium-dependent molybdenum hydroxylase system protein {ECO:0000313|EMBL:KDF09159.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
yqeB; hypothetical protein
L3_079_062G2_scaffold_420_2
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1335..2102)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE52 RepID=S1CBG4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AKE59380.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L3_079_062G2_scaffold_420_3
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2214..2723
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Escherichia albertii RepID=UPI0002BB928B
Molybdenum cofactor cytidylyltransferase {ECO:0000313|EMBL:KEY50999.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
L3_079_062G2_scaffold_420_4
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3101..6205
DNA (3105bp) protein (1035aa)
Oxidoreductase Fe-S subunit n=1 Tax=Escherichia coli BWH 32 RepID=V3JGQ2_ECOLX
Selenate reductase subunit YgfK {ECO:0000313|EMBL:KEY51000.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
ygfK; selenate reductase subunit YgfK
L3_079_062G2_scaffold_420_5
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6208..7536
DNA (1329bp) protein (443aa)
chlorohydrolase/aminohydrolase n=1 Tax=Escherichia albertii RepID=UPI0002B91F66
Chlorohydrolase {ECO:0000313|EMBL:KEY51001.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
chlorohydrolase/aminohydrolase
L3_079_062G2_scaffold_420_6
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7576..8361
DNA (786bp) protein (262aa)
Oxidoreductase n=1 Tax=Escherichia coli KTE84 RepID=L4ET57_ECOLX
Oxidoreductase {ECO:0000313|EMBL:AKE59384.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
putative selenate reductase subunit YgfM
L3_079_062G2_scaffold_420_7
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8358..11228
DNA (2871bp) protein (957aa)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein n=1 Tax=Shigella boydii 965-58 RepID=I6D5H2_SHIBO
Hypoxanthine oxidase {ECO:0000313|EMBL:AKE59385.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypoxanthine oxidase
L3_079_062G2_scaffold_420_8
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11391..12791
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Escherichia sp. TW11588 RepID=UPI0002B9B653
Xanthine permease XanP {ECO:0000313|EMBL:AKE59386.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
putative purine permease
L3_079_062G2_scaffold_420_9
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12809..14125
DNA (1317bp) protein (439aa)
guaD; guanine deaminase (EC:3.5.4.3)
Guanine deaminase n=2 Tax=Escherichia coli RepID=S1BZM8_ECOLX
Guanine deaminase {ECO:0000313|EMBL:AKE59387.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
L3_079_062G2_scaffold_420_10
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14158..15525
DNA (1368bp) protein (456aa)
Permease family protein n=4 Tax=Escherichia coli RepID=F4MC56_ECOLX
Permase {ECO:0000313|EMBL:KEY51006.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
permease family protein
L3_079_062G2_scaffold_420_11
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15587..17035
DNA (1449bp) protein (483aa)
Purine permease ygfU n=30 Tax=Escherichia coli RepID=E2QQY8_ECOLX
Purine permease {ECO:0000313|EMBL:AKE59938.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
transporter
L3_079_062G2_scaffold_420_12
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17037..17162
DNA (126bp) protein (42aa)
Uncharacterized protein {ECO:0000313|EMBL:KDF09148.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
hypothetical protein
L3_079_062G2_scaffold_420_13
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17297..17845
DNA (549bp) protein (183aa)
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202, ECO:0000256|SAAS:SAAS00231155}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl-diphosphate Delta-isomerase; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
idi; isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
isopentenyl-diphosphate delta-isomerase n=1 Tax=Escherichia sp. TW11588 RepID=UPI0002BB04F9
L3_079_062G2_scaffold_420_14
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17900..19417)
DNA (1518bp) protein (506aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TSR0_CITRI
L3_079_062G2_scaffold_420_15
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19427..20308)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AP97_CITK8
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
L3_079_062G2_scaffold_420_16
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20617..22350)
DNA (1734bp) protein (578aa)
Single-stranded DNA-specific exonuclease n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TSQ8_CITRI
Single-stranded-DNA-specific exonuclease recJ {ECO:0000313|EMBL:KDF09144.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
recJ; single-stranded DNA-specific exonuclease
L3_079_062G2_scaffold_420_17
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22356..23069)
DNA (714bp) protein (238aa)
Thiol:disulfide interchange protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TS21_CITRI
Thiol--disulfide interchange protein DsbC {ECO:0000313|EMBL:GAL50018.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
dsbC; thiol:disulfide interchange protein
L3_079_062G2_scaffold_420_18
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23093..24019)
DNA (927bp) protein (309aa)
Tyrosine recombinase XerD n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TS20_CITRI
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
xerD; tyrosine recombinase
L3_079_062G2_scaffold_420_19
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24090..24611
DNA (522bp) protein (174aa)
Flavodoxin n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TS19_CITRI
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
fldB; flavodoxin II
L3_079_062G2_scaffold_420_20
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24706..25113)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Escherichia sp. 3_2_53FAA RepID=C1HIM6_9ESCH
Membrane protein {ECO:0000313|EMBL:KEY51015.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
L3_079_062G2_scaffold_420_21
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25094..25360)
DNA (267bp) protein (89aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=L2VQM6_ECOLX
UPF0350 protein ygfY {ECO:0000313|EMBL:KDF09139.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
TPR repeat protein
L3_079_062G2_scaffold_420_22
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25617..26597
DNA (981bp) protein (327aa)
tRNA-modifying protein YgfZ n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TS16_CITRI
Global regulator {ECO:0000313|EMBL:AKE59947.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
ygfZ; tRNA-modifying protein
L3_079_062G2_scaffold_420_23
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26749..26988)
DNA (240bp) protein (80aa)
Putative membrane protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TS15_CITRI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBG91615.1}; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype; 4280).;"
Displaying 23 items

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