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L3_079_062G2_scaffold_422

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_422_1
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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351..722
DNA (372bp) protein (124aa)
DNA-binding helix-turn-helix protein n=2 Tax=Bacteroides RepID=R6A5Y6_9BACE
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDA46425.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Helix-turn-helix.
L3_079_062G2_scaffold_422_2
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(717..1322)
DNA (606bp) protein (202aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
RNase HII (EC:3.1.26.4)
Ribonuclease HII n=3 Tax=Bacteroides RepID=B0NSQ3_BACSE
L3_079_062G2_scaffold_422_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1430..1708
DNA (279bp) protein (93aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NSQ2_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS14828.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_079_062G2_scaffold_422_4
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1705..2310
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Bacteroides stercoris RepID=B0NSQ1_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS14827.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_079_062G2_scaffold_422_5
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2484..4685)
DNA (2202bp) protein (734aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AIQ2_9BACE
L3_079_062G2_scaffold_422_6
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4941..5261)
DNA (321bp) protein (107aa)
UPF0145 protein BACSTE_02513 n=3 Tax=Bacteroides RepID=B0NSP9_BACSE
UPF0145 protein BACSTE_02513 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_079_062G2_scaffold_422_7
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5367..6578)
DNA (1212bp) protein (404aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
cysteine desulfurase (EC:2.8.1.7 4.4.1.16)
Cysteine desulfurase SufS subfamily n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AC47_9BACE
L3_079_062G2_scaffold_422_8
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6663..8006)
DNA (1344bp) protein (448aa)
FeS assembly protein SufD n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6A3K7_9BACE
FeS assembly protein SufD {ECO:0000313|EMBL:CDA46418.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
ABC transporter permease
L3_079_062G2_scaffold_422_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8095..8850)
DNA (756bp) protein (252aa)
FeS assembly ATPase SufC n=2 Tax=Bacteroides stercoris RepID=B0NSP6_BACSE
FeS assembly ATPase SufC {ECO:0000313|EMBL:EDS14822.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
FeS assembly ATPase SufC
L3_079_062G2_scaffold_422_10
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8883..10337)
DNA (1455bp) protein (485aa)
FeS assembly protein SufB n=3 Tax=Bacteroides RepID=B0NSP5_BACSE
Fe-S cluster assembly protein SufB {ECO:0000313|EMBL:EPH21591.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
ABC transporter permease
L3_079_062G2_scaffold_422_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10371..10883)
DNA (513bp) protein (171aa)
CvpA family protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NSP4_BACSE
CvpA family protein {ECO:0000313|EMBL:EDS14820.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_079_062G2_scaffold_422_12
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10985..13942)
DNA (2958bp) protein (986aa)
Translation initiation factor IF-2 n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NSP3_BACSE
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
bacterial translation initiation factor 2 (bIF-2)
L3_079_062G2_scaffold_422_13
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14077..15342)
DNA (1266bp) protein (422aa)
Transcription termination factor NusA n=2 Tax=Bacteroides stercoris RepID=B0NSP2_BACSE
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
NusA antitermination factor
L3_079_062G2_scaffold_422_14
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15347..15814)
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=3 Tax=Bacteroides RepID=B0NSP1_BACSE
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_079_062G2_scaffold_422_15
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16011..16406
DNA (396bp) protein (132aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NSP0_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA46411.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_079_062G2_scaffold_422_16
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16443..17147)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6A5X0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA46410.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_079_062G2_scaffold_422_17
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17413..18264
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YEZ0_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH21584.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
lipoprotein
L3_079_062G2_scaffold_422_18
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18479..18961)
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B0NSN7_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA46408.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_079_062G2_scaffold_422_19
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18951..19460)
DNA (510bp) protein (170aa)
Sigma-70 region 2 n=3 Tax=Bacteroides RepID=B0NSN6_BACSE
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPH21582.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_079_062G2_scaffold_422_20
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19522..20295)
DNA (774bp) protein (258aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
N-acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NSN5_BACSE
L3_079_062G2_scaffold_422_21
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20295..22187)
DNA (1893bp) protein (631aa)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Biosynthetic arginine decarboxylase n=2 Tax=Bacteroides RepID=R6A5W6_9BACE
putative arginine decarboxylase
L3_079_062G2_scaffold_422_22
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22299..22826)
DNA (528bp) protein (176aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AC30_9BACE
L3_079_062G2_scaffold_422_23
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22884..23486)
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B0NSN2_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS14808.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
nitroreductase
L3_079_062G2_scaffold_422_24
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23664..24308
DNA (645bp) protein (215aa)
Predicted double-stranded RNA/RNA-DNA hybrid binding protein (EC:3.1.26.4)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NSN1_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS14807.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L3_079_062G2_scaffold_422_25
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24835..26673)
DNA (1839bp) protein (613aa)
ABC transporter, ATP-binding protein n=3 Tax=Bacteroides RepID=B0NSN0_BACSE
ATP-binding cassette, subfamily B, bacterial MsbA {ECO:0000313|EMBL:EPH21575.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
ABC transporter ATP-binding protein
Displaying 25 items

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