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L3_079_062G2_scaffold_445

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_445_1
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1044)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Enterobacteriaceae bacterium LSJC7 RepID=UPI000373351B
Uncharacterized protein {ECO:0000313|EMBL:KDF10845.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
von Willebrand factor A
L3_079_062G2_scaffold_445_2
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1217..1852)
DNA (636bp) protein (212aa)
Formate dehydrogenase, cytochrome b556(Fdo) subunit n=3 Tax=Klebsiella RepID=H3LW02_KLEOX
Formate dehydrogenase {ECO:0000313|EMBL:KEY49882.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
formate dehydrogenase-O subunit gamma
L3_079_062G2_scaffold_445_3
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1849..2754)
DNA (906bp) protein (302aa)
Formate dehydrogenase-O, iron-sulfur subunit n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TUA3_CITRI
Formate dehydrogenase {ECO:0000313|EMBL:KEY49883.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
fdoH; formate dehydrogenase-O, iron-sulfur subunit
L3_079_062G2_scaffold_445_4
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2767..5181)
DNA (2415bp) protein (805aa)
fdoG; formate dehydrogenase-O, major subunit (EC:1.2.1.2)
Formate dehydrogenase-O major subunit n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9S954_CITFR
Formate dehydrogenase {ECO:0000313|EMBL:KEY49884.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
L3_079_062G2_scaffold_445_5
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5230..5817)
DNA (588bp) protein (196aa)
Formate dehydrogenase-O small subunit n=12 Tax=Enterobacteriaceae RepID=J0M1Z7_9ENTR
Sulfate ABC transporter substrate-binding protein {ECO:0000313|EMBL:AKE60880.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
sulfate ABC transporter substrate-binding protein
L3_079_062G2_scaffold_445_6
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6040..6843
DNA (804bp) protein (268aa)
Protein FdhD homolog n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1HI93_CITFR
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
formate dehydrogenase accessory protein
L3_079_062G2_scaffold_445_7
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6972..7184
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Salmonella bongori RepID=S5NLY2_SALBN
Uncharacterized protein {ECO:0000313|EMBL:GAL51631.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_079_062G2_scaffold_445_8
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7239..8987)
DNA (1749bp) protein (583aa)
Regulator n=1 Tax=Citrobacter sp. KTE32 RepID=R8V1F7_9ENTR
Frv operon regulatory protein {ECO:0000313|EMBL:KEY49888.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
putative frv operon regulatory protein
L3_079_062G2_scaffold_445_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8987..10057)
DNA (1071bp) protein (357aa)
Peptidase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DG29_CITFR
Putative aminopeptidase ysdC {ECO:0000313|EMBL:KEL77741.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
putative fructose-specific phosphotransferase system protein FrvX
L3_079_062G2_scaffold_445_10
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10047..11492)
DNA (1446bp) protein (482aa)
Fructose-like PTS system EIIBC component n=1 Tax=Citrobacter sp. KTE32 RepID=R8UWY6_9ENTR
PTS subunit IIBC {ECO:0000313|EMBL:AKE60885.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
PTS system fructose-specific IIBC components
L3_079_062G2_scaffold_445_11
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11503..11949)
DNA (447bp) protein (149aa)
Fructose-like phosphotransferase system subunit EIIA n=1 Tax=Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15 str. 01-0170 RepID=V2IEF1_SALDZ
Fructose-like phosphotransferase enzyme IIA component {ECO:0000313|EMBL:KDF10855.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
frvA; fructose-like phosphotransferase system subunit EIIA
L3_079_062G2_scaffold_445_12
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12433..13413
DNA (981bp) protein (327aa)
6-phosphofructokinase {ECO:0000256|SAAS:SAAS00197180}; EC=2.7.1.11 {ECO:0000256|SAAS:SAAS00197180};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
Phosphofructokinase n=2 Tax=Salmonella houtenae RepID=H7EER6_SALHO
permease
L3_079_062G2_scaffold_445_13
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13425..13739
DNA (315bp) protein (105aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=2 Tax=Salmonella houtenae RepID=H7EER7_SALHO
Putative sugar phosphotransferase component II B {ECO:0000313|EMBL:ENZ84529.1}; TaxID=1240348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. houtenae serovar 16:z4,z32:-- str. RKS3027.;"
PTS lactose transporter subunit IIB
L3_079_062G2_scaffold_445_14
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13732..15099
DNA (1368bp) protein (456aa)
Putative integral membrane protein n=2 Tax=Klebsiella oxytoca RepID=I6WT43_KLEOX
Uncharacterized protein {ECO:0000313|EMBL:KDF10858.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
integral membrane protein
L3_079_062G2_scaffold_445_15
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15086..15928
DNA (843bp) protein (281aa)
iron ABC transporter substrate-binding protein n=1 Tax=Klebsiella oxytoca RepID=UPI0002E4DE74
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEY49895.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
Tagatose 1,6-bisphosphate aldolase
L3_079_062G2_scaffold_445_16
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15988..16257
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Klebsiella oxytoca RepID=UPI0003088A8F
Uncharacterized protein {ECO:0000313|EMBL:KDF10860.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
hypothetical protein
L3_079_062G2_scaffold_445_17
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16290..16727
DNA (438bp) protein (146aa)
PTS IIA-like nitrogen-regulatory protein PtsN n=2 Tax=Klebsiella oxytoca RepID=G8WB31_KLEOK
Putative phosphotransferase system enzyme IIA component {ECO:0000313|EMBL:GAL51638.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
PTS system ascorbate-specific transporter
L3_079_062G2_scaffold_445_18
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16724..17284
DNA (561bp) protein (187aa)
Glucokinase n=2 Tax=Salmonella houtenae RepID=R0ERT0_SALHO
Uncharacterized protein {ECO:0000313|EMBL:KDF10862.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
ATPase AAA
L3_079_062G2_scaffold_445_19
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17317..17640)
DNA (324bp) protein (108aa)
Branched-chain amino acid transport n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2S6M3_ENTAL
branched-chain amino acid transport
Uncharacterized protein {ECO:0000313|EMBL:GAL51640.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
L3_079_062G2_scaffold_445_20
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17640..18299)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) RepID=A9MI72_SALAR
Putative LIV-E family transporter {ECO:0000313|EMBL:GAL51641.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_079_062G2_scaffold_445_21
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18395..18991
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AL35_CITK8
Uncharacterized protein {ECO:0000313|EMBL:KDF10865.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
hypothetical protein
L3_079_062G2_scaffold_445_22
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19074..19388)
DNA (315bp) protein (105aa)
L-rhamnose mutarotase {ECO:0000256|HAMAP-Rule:MF_01663, ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|HAMAP-Rule:MF_01663, ECO:0000256|SAAS:SAAS00169483};; Rhamnose 1-epimerase {ECO:0000256|HAMAP-Rule:MF_01663}; Type-3 mutarotase {ECO:0000256|HAMAP-Rule:MF_01663}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
L-rhamnose mutarotase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TU89_CITRI
hypothetical protein
L3_079_062G2_scaffold_445_23
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19385..20533)
DNA (1149bp) protein (383aa)
alcohol dehydrogenase (EC:1.1.1.-)
Lactaldehyde reductase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BED7_9ENTR
Lactaldehyde reductase {ECO:0000313|EMBL:KDF10870.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
L3_079_062G2_scaffold_445_24
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20816..21643)
DNA (828bp) protein (276aa)
Rhamnulose-1-phosphate aldolase {ECO:0000313|EMBL:AKE60903.1}; EC=4.1.2.19 {ECO:0000313|EMBL:AKE60903.1};; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
rhamnulose-1-phosphate aldolase (EC:4.1.2.19)
rhamnulose-1-phosphate aldolase n=1 Tax=Salmonella choleraesuis RepID=UPI0002B94DB1
L3_079_062G2_scaffold_445_25
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21730..22989)
DNA (1260bp) protein (420aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
L-rhamnose isomerase n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9S942_CITFR
L-rhamnose isomerase
L3_079_062G2_scaffold_445_26
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22986..24455)
DNA (1470bp) protein (490aa)
Rhamnulokinase {ECO:0000256|HAMAP-Rule:MF_01535}; Short=RhaB {ECO:0000256|HAMAP-Rule:MF_01535};; EC=2.7.1.5 {ECO:0000256|HAMAP-Rule:MF_01535};; ATP:L-rhamnulose phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01535}; L-rhamnulose 1-kinase {ECO:0000256|HAMAP-Rule:MF_01535}; Rhamnulose kinase {ECO:0000256|HAMAP-Rule:MF_01535}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
rhaB; rhamnulokinase (EC:2.7.1.5)
Rhamnulokinase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TU85_CITRI
L3_079_062G2_scaffold_445_27
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24756..24914
DNA (159bp) protein (53aa)
HTH-type transcriptional activator RhaS n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TU84_CITRI
rhaS; L-rhamnose operon regulatory protein
HTH-type transcriptional activator RhaS {ECO:0000256|HAMAP-Rule:MF_01534, ECO:0000256|SAAS:SAAS00011458}; L-rhamnose operon regulatory protein RhaS {ECO:0000256|HAMAP-Rule:MF_01534}; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype; 4280).;"
Displaying 27 items

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