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L3_079_062G2_scaffold_464

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_464_1
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..913
DNA (912bp) protein (304aa)
Glycosyl transferase n=1 Tax=Escherichia coli ATCC 35150 RepID=U5B7U8_ECOLX
Putative glycosyltransferase YibD {ECO:0000313|EMBL:GAL50536.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
yibD; Beta-1,3-galactosyltransferase / Beta-1,4-galactosyltransferase
L3_079_062G2_scaffold_464_2
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(900..1859)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Salmonella choleraesuis RepID=UPI0002B9BC2A
Uncharacterized protein {ECO:0000313|EMBL:AKE60600.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L3_079_062G2_scaffold_464_3
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1863..3131)
DNA (1269bp) protein (423aa)
Putative peptidase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIY9_CITRI
AmiB activator {ECO:0000313|EMBL:KEY45840.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
peptidase
L3_079_062G2_scaffold_464_4
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3156..4700)
DNA (1545bp) protein (515aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIZ0_CITRI
L3_079_062G2_scaffold_464_5
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4947..5378
DNA (432bp) protein (144aa)
Putative rhodanase-like exported protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIZ1_CITRI
Uncharacterized protein {ECO:0000313|EMBL:AKE60597.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
rhodanase-like protein
L3_079_062G2_scaffold_464_6
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5411..5662
DNA (252bp) protein (84aa)
Glutaredoxin 3 n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIZ2_CITRI
grxC; glutaredoxin
Glutaredoxin 3 {ECO:0000313|EMBL:CBG90904.1}; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype; 4280).;"
L3_079_062G2_scaffold_464_7
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5725..6192
DNA (468bp) protein (156aa)
Protein-export protein SecB n=13 Tax=Enterobacteriaceae RepID=SECB_CITK8
preprotein translocase subunit SecB
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L3_079_062G2_scaffold_464_8
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6192..7211
DNA (1020bp) protein (340aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=2 Tax=Citrobacter RepID=M3DSF6_CITFR
glycerol-3-phosphate dehydrogenase
L3_079_062G2_scaffold_464_9
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7291..8112
DNA (822bp) protein (274aa)
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase n=10 Tax=Enterobacter cloacae complex RepID=D6DP80_ENTCL
Serine acetyltransferase {ECO:0000313|EMBL:KDF11861.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
L3_079_062G2_scaffold_464_10
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8191..8667)
DNA (477bp) protein (159aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
tRNA (cytidine(34)-2'-O)-methyltransferase n=5 Tax=Enterobacter cloacae complex RepID=U7CUY4_9ENTR
rRNA methylase
L3_079_062G2_scaffold_464_11
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8707..9894)
DNA (1188bp) protein (396aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01559, ECO:0000256|SAAS:SAAS00019080}; EC=1.1.-.- {ECO:0000256|HAMAP-Rule:MF_01559, ECO:0000256|SAAS:SAAS00019079};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
lldD; lactate dehydrogenase (EC:1.1.2.3)
L-lactate dehydrogenase [cytochrome] n=3 Tax=Enterobacter cloacae complex RepID=F5RR24_9ENTR
L3_079_062G2_scaffold_464_12
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9891..10667)
DNA (777bp) protein (259aa)
Putative L-lactate dehydrogenase operon regulator n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TJR5_CITRI
Transcriptional regulator {ECO:0000313|EMBL:AKE60589.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
DNA-binding transcriptional repressor LldR
L3_079_062G2_scaffold_464_13
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10664..12319)
DNA (1656bp) protein (552aa)
L-lactate permease n=2 Tax=Salmonella enterica I RepID=V2F8X0_SALET
L-lactate permease {ECO:0000313|EMBL:KDF11857.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
L-lactate permease
L3_079_062G2_scaffold_464_14
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12575..12937)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ARI8_CITK8
Uncharacterized protein {ECO:0000313|EMBL:GAL50522.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_079_062G2_scaffold_464_15
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13225..13431
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Worthington str. ATCC 9607 RepID=V1IDY1_SALET
Uncharacterized protein {ECO:0000313|EMBL:AKE60586.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L3_079_062G2_scaffold_464_16
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13447..14037)
DNA (591bp) protein (197aa)
Mannitol operon repressor n=8 Tax=Citrobacter RepID=C1MDQ8_9ENTR
Mannitol repressor protein {ECO:0000313|EMBL:AKE60585.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
Mannitol operon repressor
L3_079_062G2_scaffold_464_17
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14037..15182)
DNA (1146bp) protein (382aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
Mannitol-1-phosphate dehydrogenase n=2 Tax=Salmonella enterica I RepID=V5ZR35_SALET
SBOV37761; mannitol-1-phosphate dehydrogenase
L3_079_062G2_scaffold_464_18
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15318..17231)
DNA (1914bp) protein (638aa)
Mannitol-specific enzyme II of phosphotransferase system n=2 Tax=Salmonella bongori RepID=F8VDU8_SALBC
PTS system mannitol-specific EIICBA component {ECO:0000313|EMBL:KDF11852.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
mtlA; mannitol-specific enzyme II of phosphotransferase system
L3_079_062G2_scaffold_464_19
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17763..18125
DNA (363bp) protein (121aa)
Putative membrane protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TJS2_CITRI
Membrane protein {ECO:0000313|EMBL:KEY45824.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
L3_079_062G2_scaffold_464_20
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18128..19264
DNA (1137bp) protein (379aa)
Auxiliary transport protein, membrane fusion protein (MFP) family protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIM1_9ENTR
Membrane protein {ECO:0000313|EMBL:KEY45823.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
membrane protein
L3_079_062G2_scaffold_464_21
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19337..19945
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ARH8_CITK8
Uncharacterized protein {ECO:0000313|EMBL:KDF11849.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
putative glutathione S-transferase
L3_079_062G2_scaffold_464_22
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20044..21435
DNA (1392bp) protein (464aa)
Selenocysteine synthase {ECO:0000313|EMBL:AKE60579.1}; EC=2.9.1.1 {ECO:0000313|EMBL:AKE60579.1};; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
selA; L-seryl-tRNA(Ser) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=3 Tax=Escherichia coli RepID=R8WLX0_ECOLX
L3_079_062G2_scaffold_464_23
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21432..22877
DNA (1446bp) protein (482aa)
Selenocysteinyl-tRNA-specific translation factor n=1 Tax=Escherichia fergusonii ECD227 RepID=F0JVL4_ESCFE
Selenocysteinyl-tRNA-specific translation factor {ECO:0000313|EMBL:KEY45820.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
selB; selenocysteine-specific elongation factor
Displaying 23 items

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