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L3_079_062G2_scaffold_470

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_470_1
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..494)
DNA (492bp) protein (164aa)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
Exonuclease V subunit beta n=1 Tax=Salmonella enterica subsp. enterica serovar Miami str. 1923 RepID=V1V1N7_SALET
recB; exonuclease V subunit
L3_079_062G2_scaffold_470_2
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(487..3375)
DNA (2889bp) protein (963aa)
ptrA; protease III precursor (pitrilysin) (EC:3.4.24.55)
Protease III (Pitrilysin) n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIP1_CITRI
Protease III {ECO:0000313|EMBL:GAL50152.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
L3_079_062G2_scaffold_470_3
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3489..6857)
DNA (3369bp) protein (1123aa)
Exonuclease V subunit gamma {ECO:0000313|EMBL:AKE59827.1}; EC=3.1.11.5 {ECO:0000313|EMBL:AKE59827.1};; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
recC; exodeoxyribonuclease V gamma subunit (EC:3.1.11.5)
Exodeoxyribonuclease V gamma subunit n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIP2_CITRI
L3_079_062G2_scaffold_470_4
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6873..7193)
DNA (321bp) protein (107aa)
Prepilin peptidase-dependent protein C n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIP3_CITRI
Uncharacterized protein {ECO:0000313|EMBL:KEY50879.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
ppdC; prepilin peptidase-dependent protein C
L3_079_062G2_scaffold_470_5
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7178..7585)
DNA (408bp) protein (136aa)
Putative exported protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIP4_CITRI
Uncharacterized protein {ECO:0000313|EMBL:KDF09275.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
hypothetical protein
L3_079_062G2_scaffold_470_6
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7582..8097)
DNA (516bp) protein (172aa)
Prepilin peptidase dependent protein B n=12 Tax=Salmonella enterica I RepID=G5PS94_SALET
Uncharacterized protein {ECO:0000313|EMBL:AKE61956.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
L3_079_062G2_scaffold_470_7
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8136..8606)
DNA (471bp) protein (157aa)
Prepilin peptidase-dependent protein A n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIP6_CITRI
Uncharacterized protein {ECO:0000313|EMBL:AKE59830.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
ppdA; prepilin peptidase-dependent protein A
L3_079_062G2_scaffold_470_8
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8791..9585)
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Thymidylate synthase n=1 Tax=Shigella flexneri 1235-66 RepID=I6HCM2_SHIFL
thyA; thymidylate synthase
L3_079_062G2_scaffold_470_9
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9592..10467)
DNA (876bp) protein (292aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=3 Tax=Citrobacter RepID=C1MB05_9ENTR
L3_079_062G2_scaffold_470_10
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10616..12862)
DNA (2247bp) protein (749aa)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Shigella flexneri 1235-66 RepID=I6HCM0_SHIFL
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:KEY50885.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
ptsP; phosphoenolpyruvate-protein phosphotransferase (PTS system, enzyme I)
L3_079_062G2_scaffold_470_11
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12875..13405)
DNA (531bp) protein (177aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
RNA pyrophosphohydrolase n=13 Tax=Shigella RepID=RPPH_SHIB3
ygdP; dinucleoside polyphosphate hydrolase
L3_079_062G2_scaffold_470_12
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13697..13903)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIQ1_CITRI
Uncharacterized protein {ECO:0000313|EMBL:KDF09268.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
hypothetical protein
L3_079_062G2_scaffold_470_13
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14090..14785
DNA (696bp) protein (232aa)
DNA mismatch repair protein MutH n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIQ2_CITRI
DNA mismatch repair protein {ECO:0000313|EMBL:AKE59835.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
mutH; DNA mismatch repair protein
L3_079_062G2_scaffold_470_14
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14849..15562
DNA (714bp) protein (238aa)
Putative membrane protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TIQ3_CITRI
Uncharacterized protein {ECO:0000313|EMBL:GAL50141.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L3_079_062G2_scaffold_470_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15701..15919
DNA (219bp) protein (73aa)
Uncharacterized lipoprotein YgdR n=1427 Tax=Enterobacteriaceae RepID=YGDR_ECO57
ygdR; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU20316.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L3_079_062G2_scaffold_470_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16026..17066
DNA (1041bp) protein (347aa)
Protein tas n=6 Tax=Citrobacter RepID=J1FW74_9ENTR
Protein tas {ECO:0000313|EMBL:KDF13171.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
tas; aldo/keto reductase
L3_079_062G2_scaffold_470_17
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17099..18295)
DNA (1197bp) protein (399aa)
Lysophospholipid transporter LplT n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=LPLT_CITK8
Lysophospholipid transporter LplT {ECO:0000256|HAMAP-Rule:MF_01585, ECO:0000256|SAAS:SAAS00010763}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
lysophospholipid transporter LplT
L3_079_062G2_scaffold_470_18
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18288..20447)
DNA (2160bp) protein (720aa)
aas; Aas bifunctional protein [includes: 2-acylglycerophosphoethanolamin acyltransferase; acyl ACP synthetase (EC:2.3.1.40 6.2.1.20)
Bifunctional protein Aas n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TJI2_CITRI
Acyl-ACP synthetase {ECO:0000313|EMBL:AKE59839.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
L3_079_062G2_scaffold_470_19
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21038..22066
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AP58_CITK8
HTH-type transcriptional regulator galR {ECO:0000313|EMBL:KDF09261.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
DNA-binding transcriptional regulator GalR
L3_079_062G2_scaffold_470_20
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22080..22412
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AP59_CITK8
Putative LacI family transcriptional regulator {ECO:0000313|EMBL:GAL50134.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
Displaying 20 items

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