ggKbase home page

L3_079_062G2_scaffold_473

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_473_1
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..900
DNA (900bp) protein (300aa)
Maltoporin n=3 Tax=Enterobacter RepID=K4YR35_9ENTR
Maltoporin {ECO:0000256|HAMAP-Rule:MF_01301}; Maltose-inducible porin {ECO:0000256|HAMAP-Rule:MF_01301}; Flags: Precursor;; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
lamB; maltoporin
L3_079_062G2_scaffold_473_2
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1092..2036
DNA (945bp) protein (315aa)
Maltose operon periplasmic protein n=3 Tax=Enterobacteriaceae RepID=D2TSM2_CITRI
MalM protein {ECO:0000313|EMBL:GAL49584.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
malM; maltose operon periplasmic protein
L3_079_062G2_scaffold_473_3
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2217..2714
DNA (498bp) protein (166aa)
ubiC; chorismate--pyruvate lyase (EC:4.1.3.-)
Chorismate pyruvate-lyase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TSM1_CITRI
Chorismate--pyruvate lyase {ECO:0000313|EMBL:AKE61094.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
L3_079_062G2_scaffold_473_4
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2727..3599
DNA (873bp) protein (291aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00210629}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00272707};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
4-hydroxybenzoate octaprenyltransferase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BKU3_9ENTR
ubiA; 4-hydroxybenzoate polyprenyltransferase
L3_079_062G2_scaffold_473_5
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3715..6135)
DNA (2421bp) protein (807aa)
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00393}; Short=GPAT {ECO:0000256|HAMAP-Rule:MF_00393};; EC=2.3.1.15 {ECO:0000256|HAMAP-Rule:MF_00393};; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
plsB; glycerol-3-phosphate acyltransferase (EC:2.3.1.15)
Glycerol-3-phosphate acyltransferase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TSL9_CITRI
L3_079_062G2_scaffold_473_6
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6306..6674
DNA (369bp) protein (123aa)
dgkA; diacylglycerol kinase (EC:2.7.1.107)
Diacylglycerol kinase n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TSL8_CITRI
Diacylglycerol kinase {ECO:0000313|EMBL:AKE61097.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
L3_079_062G2_scaffold_473_7
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6797..7405
DNA (609bp) protein (203aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
LexA repressor (EC:3.4.21.88)
LexA repressor n=6 Tax=Enterobacteriaceae RepID=C1MFH2_9ENTR
L3_079_062G2_scaffold_473_8
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7491..8816
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AN83_CITK8
DNA-damage-inducible protein F {ECO:0000313|EMBL:GAL49590.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
DNA-damage-inducible SOS response protein
L3_079_062G2_scaffold_473_9
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8945..9157
DNA (213bp) protein (71aa)
Putative stress response protein YjbJ n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TSL5_CITRI
yjbJ; stress response protein YjbJ
Putative stress response protein YjbJ {ECO:0000313|EMBL:CBG90406.1}; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype; 4280).;"
L3_079_062G2_scaffold_473_10
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9243..9758)
DNA (516bp) protein (172aa)
Zinc uptake regulation protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TSL4_CITRI
Zinc uptake regulation protein {ECO:0000313|EMBL:KDF10399.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
zur; zinc uptake regulation protein
L3_079_062G2_scaffold_473_11
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10040..11350
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 RepID=V1V948_SALET
Conjugal transfer protein {ECO:0000313|EMBL:KEY51698.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
conjugative transfer protein
L3_079_062G2_scaffold_473_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11490..12431
DNA (942bp) protein (314aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1444215 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-110-08_S4_C1.;"
tRNA-dihydrouridine synthase n=4 Tax=Escherichia coli RepID=H4PD89_ECOLX
yjbN family TIM-barrel protein
L3_079_062G2_scaffold_473_13
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12564..12806
DNA (243bp) protein (81aa)
Putative outer membrane protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TRT7_CITRI
Phage shock protein {ECO:0000313|EMBL:KEY51696.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
yjbO; hypothetical protein
L3_079_062G2_scaffold_473_14
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12992..13975)
DNA (984bp) protein (328aa)
Quinone oxidoreductase (EC:1.6.5.5)
Quinone oxidoreductase, NADPH-dependent n=1 Tax=Salmonella enterica subsp. salamae serovar 58:l,z13,z28:z6 str. 00-0163 RepID=V1FNX6_SALCE
Quinone oxidoreductase {ECO:0000313|EMBL:KEY51695.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
L3_079_062G2_scaffold_473_15
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14040..15455
DNA (1416bp) protein (472aa)
Replicative DNA helicase protein DnaB n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TRT5_CITRI
Replicative DNA helicase {ECO:0000313|EMBL:KDF10404.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
dnaB; replicative DNA helicase protein DnaB
L3_079_062G2_scaffold_473_16
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15551..16630
DNA (1080bp) protein (360aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
Alanine racemase n=1 Tax=Escherichia coli W26 RepID=I0VXU5_ECOLX
alr; alanine racemase
L3_079_062G2_scaffold_473_17
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16818..18011
DNA (1194bp) protein (398aa)
Aromatic amino acid aminotransferase {ECO:0000313|EMBL:KEY51692.1}; EC=2.6.1.57 {ECO:0000313|EMBL:KEY51692.1};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
aromatic amino acid aminotransferase n=1 Tax=Escherichia albertii RepID=UPI0002B99720
aromatic amino acid aminotransferase
L3_079_062G2_scaffold_473_18
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18186..18899
DNA (714bp) protein (238aa)
Class B acid phosphatase {ECO:0000256|PIRNR:PIRNR017818}; EC=3.1.3.2 {ECO:0000256|PIRNR:PIRNR017818};; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
aphA; acid phosphatase (EC:3.1.3.2)
Class B acid phosphatase n=5 Tax=Citrobacter RepID=C1MFI3_9ENTR
L3_079_062G2_scaffold_473_19
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19151..19507
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=C1MFI4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEY51690.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
L3_079_062G2_scaffold_473_20
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19549..21915)
DNA (2367bp) protein (789aa)
UvrABC system protein A n=321 Tax=Salmonella choleraesuis RepID=A9N1N5_SALPB
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
uvrA; excinuclease ABC subunit A
Displaying 20 items

View Taxonomy