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L3_079_062G2_scaffold_576

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_576_1
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..82)
DNA (81bp) protein (27aa)
Sugar (And other) transporter family protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HAS0_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:KDF12880.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
hypothetical protein
L3_079_062G2_scaffold_576_2
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(88..1293)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ALQ7_CITK8
Metabolite transporter {ECO:0000313|EMBL:KEY45940.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
L3_079_062G2_scaffold_576_3
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1521..1808)
DNA (288bp) protein (96aa)
Ferredoxin-like protein FixX n=2 Tax=Salmonella enterica I RepID=G5PHV7_SALET
Ferredoxin-like protein fixX {ECO:0000313|EMBL:KDF12881.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
fixX; ferredoxin like protein FixX
L3_079_062G2_scaffold_576_4
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1805..3091)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ALQ9_CITK8
Oxidoreductase {ECO:0000313|EMBL:KEY45938.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
putative oxidoreductase FixC
L3_079_062G2_scaffold_576_5
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3114..4055)
DNA (942bp) protein (314aa)
Electron transfer flavoprotein FixB n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CFA9_CITFR
Protein FixB {ECO:0000256|HAMAP-Rule:MF_01056}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
fixB; FixB protein
L3_079_062G2_scaffold_576_6
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4068..4841)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ALR1_CITK8
Protein FixA {ECO:0000256|HAMAP-Rule:MF_01055}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
putative electron transfer flavoprotein FixA
L3_079_062G2_scaffold_576_7
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5320..6837
DNA (1518bp) protein (506aa)
L-carnitine/gamma-butyrobetaine antiporter n=6 Tax=Citrobacter RepID=J1G2S2_9ENTR
L-carnitine/gamma-butyrobetaine antiporter {ECO:0000256|HAMAP-Rule:MF_01049}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
L-carnitine/gamma-butyrobetaine antiporter
L3_079_062G2_scaffold_576_8
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6870..8012
DNA (1143bp) protein (381aa)
Crotonobetainyl-CoA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01052}; EC=1.3.99.- {ECO:0000256|HAMAP-Rule:MF_01052};; Crotonobetainyl-CoA reductase {ECO:0000256|HAMAP-Rule:MF_01052}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
Crotonobetainyl-CoA dehydrogenase n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=CAIA_CITK8
crotonobetainyl-CoA dehydrogenase
L3_079_062G2_scaffold_576_9
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8078..9373
DNA (1296bp) protein (432aa)
L-carnitine CoA-transferase {ECO:0000256|HAMAP-Rule:MF_01050}; EC=2.8.3.21 {ECO:0000256|HAMAP-Rule:MF_01050};; Crotonobetainyl-CoA:carnitine CoA-transferase {ECO:0000256|HAMAP-Rule:MF_01050}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
Crotonobetainyl-CoA:carnitine CoA-transferase n=1 Tax=Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 RepID=V1VIV9_SALET
caiB; L-carnitine dehydratase
L3_079_062G2_scaffold_576_10
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9438..10991
DNA (1554bp) protein (518aa)
Probable crotonobetaine/carnitine-CoA ligase {ECO:0000256|HAMAP-Rule:MF_01524}; EC=6.2.1.- {ECO:0000256|HAMAP-Rule:MF_01524};; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
Probable crotonobetaine/carnitine-CoA ligase n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=CAIC_CITK8
caiC; putative crotonobetaine/carnitine-CoA ligase
L3_079_062G2_scaffold_576_11
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11044..11829
DNA (786bp) protein (262aa)
Carnitinyl-CoA dehydratase {ECO:0000256|HAMAP-Rule:MF_01051}; EC=4.2.1.149 {ECO:0000256|HAMAP-Rule:MF_01051};; Crotonobetainyl-CoA hydratase {ECO:0000256|HAMAP-Rule:MF_01051}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
Carnitinyl-CoA dehydratase n=1 Tax=Escherichia coli KTE146 RepID=L4JFM4_ECOLX
caiD; carnitinyl-CoA dehydratase
L3_079_062G2_scaffold_576_12
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11965..12561
DNA (597bp) protein (199aa)
Carnitine operon protein CaiE n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=CAIE_CITK8
Carnitine operon protein CaiE {ECO:0000256|HAMAP-Rule:MF_01525}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
carnitine operon protein CaiE
L3_079_062G2_scaffold_576_13
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12601..12990)
DNA (390bp) protein (130aa)
Transcriptional activator n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TGM1_CITRI
Transcriptional regulator {ECO:0000313|EMBL:AKE57667.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
caiF; transcriptional activator
L3_079_062G2_scaffold_576_14
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13240..15846)
DNA (2607bp) protein (869aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=114 Tax=Salmonella enterica I RepID=B5F747_SALA4
Displaying 14 items

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