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L3_079_062G2_scaffold_579

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_579_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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100..1008
DNA (909bp) protein (303aa)
DNA-binding helix-turn-helix protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YW65_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EHM39393.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
transcriptional regulator, XRE family
L3_079_062G2_scaffold_579_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1193..1426)
DNA (234bp) protein (78aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YW66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34237.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G2_scaffold_579_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1605..2018)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YW67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55349.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_079_062G2_scaffold_579_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2138..3466)
DNA (1329bp) protein (443aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC68_9FIRM
L3_079_062G2_scaffold_579_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3620..4978)
DNA (1359bp) protein (453aa)
UPF0210 protein HMPREF0372_03785 n=3 Tax=Clostridiales RepID=G9YW69_9FIRM
UPF0210 protein HMPREF0995_02047 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G2_scaffold_579_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5350..5541)
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34241.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G2_scaffold_579_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5582..5851)
DNA (270bp) protein (90aa)
UPF0237 protein HMPREF0372_04252 n=3 Tax=Clostridiales RepID=G9YXI4_9FIRM
UPF0237 protein HMPREF0995_02049 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ACT domain-containing protein
L3_079_062G2_scaffold_579_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5895..6479)
DNA (585bp) protein (195aa)
5'-nucleotidase YfbR (EC:3.1.3.5)
HD domain protein n=3 Tax=Clostridiales RepID=G9YXI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34243.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G2_scaffold_579_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6582..6827)
DNA (246bp) protein (82aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YXI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34244.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
HPr-related phosphotransferase system component
L3_079_062G2_scaffold_579_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6995..8287
DNA (1293bp) protein (431aa)
tRNA methylthiotransferase YqeV n=2 Tax=Clostridiales RepID=G9YXI7_9FIRM
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EHO34245.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G2_scaffold_579_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8284..9696
DNA (1413bp) protein (471aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34246.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
peptidase S41
L3_079_062G2_scaffold_579_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9709..10260)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34247.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G2_scaffold_579_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10412..11242
DNA (831bp) protein (277aa)
Thymidylate synthase {ECO:0000256|SAAS:SAAS00215270}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00273274};; EC=2.1.1.45 {ECO:0000256|SAAS:SAAS00215290};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC77_9FIRM
L3_079_062G2_scaffold_579_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11255..11752
DNA (498bp) protein (166aa)
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34249.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_062G2_scaffold_579_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11739..12308
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34250.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
NUDIX hydrolase
L3_079_062G2_scaffold_579_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12464..15802
DNA (3339bp) protein (1113aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33839.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
cell surface protein
Displaying 16 items

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