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L3_079_062G2_scaffold_945

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_945_1
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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284..541
DNA (258bp) protein (86aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MQL3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDB88112.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
XRE family transcriptional regulator
L3_079_062G2_scaffold_945_2
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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999..1208
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P635_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS13192.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_079_062G2_scaffold_945_3
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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1210..1665
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BK06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA64588.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L3_079_062G2_scaffold_945_4
unknown

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1755..1949
DNA (195bp) protein (65aa)

This feature has no annotations

L3_079_062G2_scaffold_945_5
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2038..2241
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M3B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62362.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L3_079_062G2_scaffold_945_6
unknown

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comp(2580..2678)
DNA (99bp) protein (33aa)

This feature has no annotations

L3_079_062G2_scaffold_945_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2821..3117)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33523.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G2_scaffold_945_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3168..3932)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YP37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM52932.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
endolysin
L3_079_062G2_scaffold_945_9
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(3907..4137)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IDT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40235.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L3_079_062G2_scaffold_945_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4151..4498)
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QHP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK57859.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_062G2_scaffold_945_11
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4504..4905)
DNA (402bp) protein (134aa)
Putative isoaspartyl peptidase/L-asparaginase 4 (L-asparagine amidohydrolase 4) n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A7P2_9CLOT
Putative isoaspartyl peptidase/L-asparaginase 4 (L-asparagine amidohydrolase 4) {ECO:0000313|EMBL:CCX37904.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L3_079_062G2_scaffold_945_12
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4905..5582)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A4S7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37903.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L3_079_062G2_scaffold_945_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5543..6718)
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34482.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_062G2_scaffold_945_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7172..7636)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ARY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI62875.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Displaying 14 items

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