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L3_079_062G2_scaffold_436

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_062G2_scaffold_436_1
unknown

Not on your lists

2..169
DNA (168bp) protein (56aa)

This feature has no annotations

L3_079_062G2_scaffold_436_2
unknown

Not on your lists

comp(495..959)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QQM7_LACRH
L3_079_062G2_scaffold_436_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1395..1550)
DNA (156bp) protein (52aa)
Conserved protein n=2 Tax=Lactobacillus rhamnosus RepID=C7TE19_LACRG
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR87862.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI42418.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_079_062G2_scaffold_436_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1775..3328)
DNA (1554bp) protein (518aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TE20_LACRG
GMP synthase
L3_079_062G2_scaffold_436_5
unknown

Not on your lists

comp(3364..3471)
DNA (108bp) protein (36aa)

This feature has no annotations

L3_079_062G2_scaffold_436_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3510..4436)
DNA (927bp) protein (309aa)
Pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530};; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_00215}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Pantothenate kinase n=9 Tax=Lactobacillus rhamnosus RepID=B5QQM4_LACRH
coaA; pantothenate kinase
L3_079_062G2_scaffold_436_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4752..5102
DNA (351bp) protein (117aa)
Conserved protein n=2 Tax=Lactobacillus rhamnosus RepID=C7TE22_LACRG
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR87865.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI42421.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_079_062G2_scaffold_436_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5152..5439
DNA (288bp) protein (96aa)
Conserved protein n=2 Tax=Lactobacillus rhamnosus RepID=C7TE23_LACRG
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR87866.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI42422.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_079_062G2_scaffold_436_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5488..6897)
DNA (1410bp) protein (470aa)
Dipeptidase n=2 Tax=Lactobacillus rhamnosus RepID=B5QQM1_LACRH
dipeptidase
Dipeptidase {ECO:0000313|EMBL:BAI42423.1}; Dipeptidase A {ECO:0000313|EMBL:CAR87867.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_079_062G2_scaffold_436_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7811..8287)
DNA (477bp) protein (159aa)
Acyl-CoA hydrolase n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TE26_LACRG
putative acyl-CoA hydrolase
Acyl-CoA hydrolase {ECO:0000313|EMBL:CAR87869.1}; Putative acyl-CoA hydrolase {ECO:0000313|EMBL:BAI42424.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_079_062G2_scaffold_436_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8292..10583)
DNA (2292bp) protein (764aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
DNA and RNA helicase n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TE27_LACRG
DNA and RNA helicase
L3_079_062G2_scaffold_436_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11276..13105
DNA (1830bp) protein (610aa)
Na( )/H( ) antiporter n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TE30_LACRG
Na+/H+ antiporter
Na( )/H( ) antiporter {ECO:0000313|EMBL:CAR87873.1}; Na+/H+ antiporter {ECO:0000313|EMBL:BAI42428.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_079_062G2_scaffold_436_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13261..14166
DNA (906bp) protein (302aa)
Proline iminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; Short=PIP {ECO:0000256|PIRNR:PIRNR005539};; EC=3.4.11.5 {ECO:0000256|PIRNR:PIRNR005539};; Prolyl aminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Proline iminopeptidase n=11 Tax=Lactobacillus rhamnosus RepID=S5A4X2_LACRH
prolyl aminopeptidase
L3_079_062G2_scaffold_436_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14245..14706
DNA (462bp) protein (154aa)
Conserved protein n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TE32_LACRG
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR87875.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI42430.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_079_062G2_scaffold_436_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14788..16143)
DNA (1356bp) protein (452aa)
Mn2 /Fe2 transporter, NRAMP family n=7 Tax=Lactobacillus rhamnosus RepID=C7TE33_LACRG
Manganese transport protein MntH
Manganese transport protein MntH {ECO:0000313|EMBL:EKS53191.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_079_062G2_scaffold_436_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16127..17098)
DNA (972bp) protein (324aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Ferrochelatase n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TE34_LACRG
ferrochelatase
L3_079_062G2_scaffold_436_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17393..18058
DNA (666bp) protein (222aa)
Phosphoglycerate mutase family protein n=8 Tax=Lactobacillus rhamnosus RepID=B5QQL0_LACRH
pgm; phosphoglycerate mutase
Phosphoglycerate mutase family {ECO:0000313|EMBL:AGP74668.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_079_062G2_scaffold_436_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18190..19083)
DNA (894bp) protein (298aa)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Rhamnulose-1-phosphate aldolase n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C8UVN0_LACRG
rhamnulose-1-phosphate aldolase
L3_079_062G2_scaffold_436_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19517..21325)
DNA (1809bp) protein (603aa)
ABC transporter, permease protein n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TE37_LACRG
antimicrobial peptide ABC transporter permease component
ABC transporter, permease protein {ECO:0000313|EMBL:CAR87880.1}; Antimicrobial peptide ABC transporter permease component {ECO:0000313|EMBL:BAI42435.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_079_062G2_scaffold_436_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21338..22096)
DNA (759bp) protein (253aa)
ABC transporter, ATP-binding protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TE38_LACRG
antimicrobial peptide ABC transporter ATP-binding component
Bacitracin ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC97077.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_079_062G2_scaffold_436_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22397..24067
DNA (1671bp) protein (557aa)
Amino acid transporter n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TE39_LACRG
amino acid transporter protein
Amino acid transporter {ECO:0000313|EMBL:CAR87882.1}; Amino acid transporter protein {ECO:0000313|EMBL:BAI42437.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_079_062G2_scaffold_436_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24397..25281
DNA (885bp) protein (295aa)
Lipid kinase from diacylglycerol kinase family protein n=2 Tax=Lactobacillus rhamnosus RepID=B5QQK4_LACRH
diacylglycerol kinase
Diacylglycerol kinase {ECO:0000313|EMBL:BAI42438.1}; Lipid kinase from diacylglycerol kinase family protein {ECO:0000313|EMBL:CAR87883.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Displaying 22 items

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