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L3_079_127G1_scaffold_295

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Displaying items 1-30 of 62 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_127G1_scaffold_295_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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244..1098
DNA (855bp) protein (285aa)
Predicted transcriptional regulators n=2 Tax=Clostridium RepID=D6DEE6_CLOSC
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK76070.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_295_2
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1937..2167
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D4CDZ0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK76069.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_295_3
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3078..3725)
DNA (648bp) protein (216aa)
Sporulation and spore germination n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DEE3_CLOSC
Sporulation and spore germination.
Sporulation and spore germination {ECO:0000313|EMBL:CBK76067.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_295_4
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3872..4312)
DNA (441bp) protein (147aa)
Transcriptional regulator MarR family n=1 Tax=Clostridium sp. CAG:149 RepID=R5LUV5_9CLOT
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCY83020.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
MarR family transcriptional regulator
L3_079_127G1_scaffold_295_5
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4503..5030)
DNA (528bp) protein (176aa)
Uncharacterized membrane protein n=2 Tax=Clostridium RepID=D6DEE2_CLOSC
Uncharacterized membrane protein
Uncharacterized membrane protein {ECO:0000313|EMBL:CBK76066.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_295_6
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5491..5847
DNA (357bp) protein (119aa)
Transcriptional regulator, Spx/MgsR family n=4 Tax=Clostridiales RepID=D4CDY3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL35904.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_079_127G1_scaffold_295_7
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5877..6968)
DNA (1092bp) protein (364aa)
Putative TIGR00300 family protein n=2 Tax=Clostridium RepID=D4CDY2_9CLOT
Putative TIGR00300 family protein {ECO:0000313|EMBL:CCY83035.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L3_079_127G1_scaffold_295_8
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7173..7802)
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R5MCV9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY83036.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
nucleoside recognition domain-containing protein
L3_079_127G1_scaffold_295_9
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7881..8981)
DNA (1101bp) protein (367aa)
Dioxygenases related to 2-nitropropane dioxygenase n=1 Tax=Clostridium sp. CAG:149 RepID=R5MD94_9CLOT
Dioxygenases related to 2-nitropropane dioxygenase {ECO:0000313|EMBL:CCY83037.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Dioxygenases related to 2-nitropropane dioxygenase
L3_079_127G1_scaffold_295_10
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9013..10896)
DNA (1884bp) protein (628aa)
Acetyl-CoA carboxylase {ECO:0000256|SAAS:SAAS00057486}; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-CoA carboxylase carboxyltransferase subunit alpha n=1 Tax=Clostridium sp. CAG:149 RepID=R5M0H8_9CLOT
L3_079_127G1_scaffold_295_11
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10989..12341)
DNA (1353bp) protein (451aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Clostridium sp. CAG:149 RepID=R5MCW1_9CLOT
Acetyl-CoA carboxylase biotin carboxylase subunit {ECO:0000313|EMBL:CCY83041.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_127G1_scaffold_295_12
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12351..12773)
DNA (423bp) protein (141aa)
beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=3 Tax=Clostridium RepID=D6DED7_CLOSC
L3_079_127G1_scaffold_295_13
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12833..13348)
DNA (516bp) protein (172aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=2 Tax=Clostridium RepID=D6DED6_CLOSC
acetyl-CoA carboxylase, biotin carboxyl carrier protein
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:CBK76060.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_295_14
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13367..14605)
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447, ECO:0000313|EMBL:CBK76059.1}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447, ECO:0000313|EMBL:CBK76059.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DED5_CLOSC
L3_079_127G1_scaffold_295_15
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14657..15400)
DNA (744bp) protein (248aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:CBL35900.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CBL35900.1};; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=4 Tax=Clostridiales RepID=D4MQ64_9FIRM
L3_079_127G1_scaffold_295_16
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15496..16413)
DNA (918bp) protein (306aa)
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Malonyl CoA-acyl carrier protein transacylase n=3 Tax=Clostridium RepID=D6DED3_CLOSC
L3_079_127G1_scaffold_295_17
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16580..17503)
DNA (924bp) protein (308aa)
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Putative enoyl-(Acyl-carrier-protein) reductase II {ECO:0000313|EMBL:CBL35899.1}; EC=1.3.1.- {ECO:0000313|EMBL:CBL35899.1};; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
Putative enoyl-(Acyl-carrier-protein) reductase II n=4 Tax=Clostridiales RepID=D4MQ63_9FIRM
L3_079_127G1_scaffold_295_18
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17503..17736)
DNA (234bp) protein (78aa)
Acyl carrier protein n=4 Tax=Clostridiales RepID=D4MQ62_9FIRM
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_127G1_scaffold_295_19
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17907..18872)
DNA (966bp) protein (322aa)
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.180 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815, ECO:0000313|EMBL:CBK76054.1};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=3 Tax=Clostridium RepID=D6DED0_CLOSC
L3_079_127G1_scaffold_295_20
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19452..20147
DNA (696bp) protein (232aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CDW8_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EFE12071.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_079_127G1_scaffold_295_21
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20154..22547
DNA (2394bp) protein (798aa)
Histidine kinase A domain protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5M0K1_9CLOT
Histidine kinase A domain protein {ECO:0000313|EMBL:CCY83069.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Signal transduction histidine kinase
L3_079_127G1_scaffold_295_22
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22549..23946)
DNA (1398bp) protein (466aa)
Putative efflux protein, MATE family n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DEC6_CLOSC
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBK76050.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_295_23
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24335..25243
DNA (909bp) protein (303aa)
Transglutaminase-like protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CDW4_9CLOT
Transglutaminase-like protein {ECO:0000313|EMBL:EFE12067.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Transglutaminase-like enzymes, putative cysteine proteases
L3_079_127G1_scaffold_295_24
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25277..26323
DNA (1047bp) protein (349aa)
Type II secretory pathway, component PulF n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MQ57_9FIRM
Type II secretory pathway, component PulF
Type II secretory pathway, component PulF {ECO:0000313|EMBL:CBL35893.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_079_127G1_scaffold_295_25
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26458..26811
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CDW2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL35892.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_079_127G1_scaffold_295_26
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26805..27410
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DEC1_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK76045.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_295_27
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27422..27925
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D4CDW0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK76044.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_295_28
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27922..28389
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D4CDV9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK76043.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_295_29
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28417..29475
DNA (1059bp) protein (353aa)
Pilus retraction protein PilT n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DEB8_CLOSC
pilus retraction protein PilT
Pilus retraction protein PilT {ECO:0000313|EMBL:CBK76042.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_295_30
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30169..30330)
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DEB7_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK76041.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Displaying items 1-30 of 62 in total

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