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L3_079_127G1_scaffold_417

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Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_127G1_scaffold_417_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(92..1132)
DNA (1041bp) protein (347aa)
ABC-type sugar transport system, periplasmic component n=3 Tax=Clostridiales RepID=D6DGJ3_CLOSC
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CBK76817.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_417_2
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1233..1850)
DNA (618bp) protein (206aa)
Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components n=1 Tax=Clostridium sp. CAG:149 RepID=R5M5B9_9CLOT
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components
Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components {ECO:0000313|EMBL:CCY86708.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_127G1_scaffold_417_3
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1987..2940
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CH78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE10915.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Sugar diacid utilization regulator
L3_079_127G1_scaffold_417_4
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3109..3489
DNA (381bp) protein (127aa)
Transcriptional regulator, MerR family n=3 Tax=Clostridiales RepID=D4MPZ1_9FIRM
transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CBL35827.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_079_127G1_scaffold_417_5
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3543..5012)
DNA (1470bp) protein (490aa)
Amidohydrolase n=3 Tax=Clostridium RepID=D6DGI8_CLOSC
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:CBK76812.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_417_6
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5137..6765)
DNA (1629bp) protein (543aa)
ABC-type dipeptide transport system, periplasmic component n=3 Tax=Clostridiales RepID=D4MPZ0_9FIRM
ABC-type dipeptide transport system, periplasmic component
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:CBL35826.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_079_127G1_scaffold_417_7
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6890..7873)
DNA (984bp) protein (328aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain n=2 Tax=Clostridium RepID=D6DGI5_CLOSC
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
Oligopeptide/dipeptide ABC transporter ATP-binding protein C-terminal domain {ECO:0000313|EMBL:CCY86731.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_127G1_scaffold_417_8
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7860..8876)
DNA (1017bp) protein (339aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain n=2 Tax=Clostridium RepID=D6DGI4_CLOSC
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain {ECO:0000313|EMBL:CBK76808.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_417_9
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8890..9801)
DNA (912bp) protein (304aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=4 Tax=Clostridiales RepID=D4MPY9_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components {ECO:0000313|EMBL:CBL35825.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_079_127G1_scaffold_417_10
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9805..10761)
DNA (957bp) protein (319aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=3 Tax=Clostridium RepID=D6DGI2_CLOSC
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components {ECO:0000313|EMBL:CBK76806.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_417_11
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11330..12337
DNA (1008bp) protein (336aa)
Uroporphyrinogen-III decarboxylase n=3 Tax=Clostridium RepID=D6DGI1_CLOSC
Uroporphyrinogen-III decarboxylase
Uroporphyrinogen-III decarboxylase {ECO:0000313|EMBL:CBK76805.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_417_12
unknown

Not on your lists

12337..12591
DNA (255bp) protein (85aa)

This feature has no annotations

L3_079_127G1_scaffold_417_13
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12507..13451)
DNA (945bp) protein (315aa)
Transcriptional regulator n=3 Tax=Clostridium RepID=D6DGI0_CLOSC
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCY86741.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_127G1_scaffold_417_14
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13580..14866
DNA (1287bp) protein (429aa)
UPF0597 protein CLS_11190 n=3 Tax=Clostridium RepID=D6DGH9_CLOSC
hypothetical protein
UPF0597 protein BN500_00334 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_127G1_scaffold_417_15
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15029..15229
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CH65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE10901.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_079_127G1_scaffold_417_16
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15487..16161
DNA (675bp) protein (225aa)
3-Cys thioredoxin peroxidase (EC:1.11.1.15)
3-Cys thioredoxin peroxidase {ECO:0000313|EMBL:CBK76801.1}; EC=1.11.1.15 {ECO:0000313|EMBL:CBK76801.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
3-Cys thioredoxin peroxidase n=2 Tax=Clostridium RepID=D6DGH7_CLOSC
L3_079_127G1_scaffold_417_17
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16308..16517)
DNA (210bp) protein (70aa)
Predicted nucleic-acid-binding protein containing a Zn-ribbon domain n=4 Tax=Clostridiales RepID=D4MPY5_9FIRM
Predicted nucleic-acid-binding protein containing a Zn-ribbon domain
Predicted nucleic-acid-binding protein containing a Zn-ribbon domain {ECO:0000313|EMBL:CBL35821.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_079_127G1_scaffold_417_18
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16557..17201)
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MPY4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL35820.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_079_127G1_scaffold_417_19
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17323..18822)
DNA (1500bp) protein (500aa)
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
4-alpha-glucanotransferase n=3 Tax=Clostridium RepID=D6DGH4_CLOSC
L3_079_127G1_scaffold_417_20
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18939..19757)
DNA (819bp) protein (273aa)
HAD superfamily (subfamily IA) hydrolase, TIGR02254 (EC:3.8.1.2)
HAD hydrolase TIGR02254 family n=2 Tax=Clostridium RepID=R5MP13_9CLOT
HAD hydrolase TIGR02254 family {ECO:0000313|EMBL:CCY86757.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_127G1_scaffold_417_21
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19754..21028)
DNA (1275bp) protein (425aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Clostridium sp. M62/1 RepID=D4CH58_9CLOT
L3_079_127G1_scaffold_417_22
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21142..21519)
DNA (378bp) protein (126aa)
Lactoylglutathione lyase and related lyases (EC:4.4.1.5)
Lactoylglutathione lyase and related lyases {ECO:0000313|EMBL:CBL35818.1}; EC=4.4.1.5 {ECO:0000313|EMBL:CBL35818.1};; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
Lactoylglutathione lyase and related lyases n=4 Tax=Clostridiales RepID=D4MPY2_9FIRM
L3_079_127G1_scaffold_417_23
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21516..22238)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=D4MPY1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL35817.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_079_127G1_scaffold_417_24
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22392..22787)
DNA (396bp) protein (132aa)
Thioesterase superfamily n=3 Tax=Clostridiales RepID=D4MPY0_9FIRM
Thioesterase superfamily
Thioesterase superfamily {ECO:0000313|EMBL:CBL35816.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_079_127G1_scaffold_417_25
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22974..23375)
DNA (402bp) protein (134aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=D4CH54_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL35815.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_079_127G1_scaffold_417_26
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23780..24706
DNA (927bp) protein (309aa)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase (EC:3.2.2.- 4.2.99.18)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase n=2 Tax=Clostridium RepID=D6DGG7_CLOSC
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase {ECO:0000313|EMBL:CCY85889.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_127G1_scaffold_417_27
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24910..25338)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R5MLH3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK76790.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_417_28
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25398..26120)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DGG5_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK76789.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_127G1_scaffold_417_29
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26117..26659)
DNA (543bp) protein (181aa)
RNA polymerase sigma factor, sigma-70 family n=4 Tax=Clostridiales RepID=D4MPX7_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBL35813.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_079_127G1_scaffold_417_30
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27028..27900)
DNA (873bp) protein (291aa)
Fe-S oxidoreductase n=3 Tax=Clostridium RepID=D6DGG2_CLOSC
Fe-S oxidoreductase
Radical SAM domain protein {ECO:0000313|EMBL:CCY85878.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Displaying items 1-30 of 46 in total

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