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L3_079_363G1_scaffold_33

Search features with annotation key words

Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_33_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..1027
DNA (1026bp) protein (342aa)
Osmosensitive K+ channel His kinase sensor domain protein n=3 Tax=Parabacteroides RepID=A7ALK5_9PORP
Osmosensitive K+ channel His kinase sensor domain protein {ECO:0000313|EMBL:CDD14556.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
osmosensitive K+ channel histidine kinase
L3_079_363G1_scaffold_33_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1045..2757
DNA (1713bp) protein (571aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B3Q7_9PORP
two-component system sensor histidine kinase, FrrD
L3_079_363G1_scaffold_33_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2786..4114
DNA (1329bp) protein (443aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Aspartokinase n=2 Tax=Parabacteroides merdae RepID=A7ALK7_9PORP
aspartokinase
L3_079_363G1_scaffold_33_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4345..5664)
DNA (1320bp) protein (440aa)
TldD/PmbA family protein n=2 Tax=Parabacteroides merdae RepID=A7ALK9_9PORP
TldD/PmbA family protein {ECO:0000313|EMBL:EDN84255.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
modulator of DNA gyrase
L3_079_363G1_scaffold_33_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5754..7286)
DNA (1533bp) protein (511aa)
Tat pathway signal sequence domain protein n=2 Tax=Parabacteroides merdae RepID=A7ALL0_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDN84256.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
modulator of DNA gyrase
L3_079_363G1_scaffold_33_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7295..8530)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XE40_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14561.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
anaerobic sulfatase-maturase
L3_079_363G1_scaffold_33_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8604..9617)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y863_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14562.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
N-acetylmuramoyl-L-alanine amidase
L3_079_363G1_scaffold_33_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9889..10449)
DNA (561bp) protein (187aa)
putative NUDIX/MutT-family protein (EC:3.6.1.13)
Hydrolase NUDIX family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTC1_9PORP
Hydrolase NUDIX family {ECO:0000313|EMBL:CDD14563.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_079_363G1_scaffold_33_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10559..12007
DNA (1449bp) protein (483aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A7ALL8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14564.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_363G1_scaffold_33_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11982..13325
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZ55_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14565.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_363G1_scaffold_33_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13318..14877
DNA (1560bp) protein (520aa)
MBOAT family protein n=2 Tax=Parabacteroides merdae RepID=A7ALM0_9PORP
MBOAT family protein {ECO:0000313|EMBL:EDN84266.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
alginate O-acetyltransferase
L3_079_363G1_scaffold_33_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14977..16668)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZKG3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16229.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
RagB/SusD family protein
L3_079_363G1_scaffold_33_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16725..20114)
DNA (3390bp) protein (1130aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides merdae RepID=A7ALM2_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDN84268.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
TonB-dependent transducer
L3_079_363G1_scaffold_33_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20379..21407)
DNA (1029bp) protein (343aa)
Sigma factor regulatory protein FecR/PupR family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZ58_9PORP
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CDD14570.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
anti-FecI sigma factor, FecR
L3_079_363G1_scaffold_33_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21448..22038)
DNA (591bp) protein (197aa)
RNA polymerase sigma-70 factor n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XE49_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDD14571.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_079_363G1_scaffold_33_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22482..22616)
DNA (135bp) protein (45aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZY27_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14572.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_079_363G1_scaffold_33_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22812..24689
DNA (1878bp) protein (626aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7ALM6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14573.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_363G1_scaffold_33_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24825..27137
DNA (2313bp) protein (771aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
UvrD/REP helicase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X627_9PORP
helicase
L3_079_363G1_scaffold_33_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28004..29170)
DNA (1167bp) protein (389aa)
Aminotransferase class I/II n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XE53_9PORP
Aminotransferase class I/II {ECO:0000313|EMBL:CDD14576.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cystathionine beta-lyase
L3_079_363G1_scaffold_33_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29481..30380)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y875_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14577.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_363G1_scaffold_33_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30531..30776)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6AKG6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84281.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
gamma-carboxymuconolactone decarboxylase
L3_079_363G1_scaffold_33_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30848..31087)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTD2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14578.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Carboxymuconolactone decarboxylase
L3_079_363G1_scaffold_33_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31095..31574)
DNA (480bp) protein (160aa)
Tat pathway signal sequence domain protein n=2 Tax=Parabacteroides merdae RepID=A7ALN7_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDN84283.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
NADPH-flavin oxidoreductase
L3_079_363G1_scaffold_33_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31744..32640
DNA (897bp) protein (299aa)
Transcriptional regulator, AraC family n=3 Tax=Parabacteroides RepID=A7ALN8_9PORP
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDN84284.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional regulator
L3_079_363G1_scaffold_33_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32658..33488
DNA (831bp) protein (277aa)
Transcriptional regulator AraC family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XE57_9PORP
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD14581.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
AraC family transcriptional regulator
L3_079_363G1_scaffold_33_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33861..35567)
DNA (1707bp) protein (569aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Phosphomethylpyrimidine synthase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTD7_9PORP
thiamine biosynthesis protein ThiC
L3_079_363G1_scaffold_33_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35589..36326)
DNA (738bp) protein (246aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Thiamine-phosphate synthase n=2 Tax=Parabacteroides merdae RepID=A7ALP7_9PORP
thiamine-phosphate pyrophosphorylase
L3_079_363G1_scaffold_33_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36317..36916)
DNA (600bp) protein (200aa)
Thiamine monophosphate synthase/TENI n=2 Tax=Parabacteroides merdae RepID=A7ALP8_9PORP
Thiamine monophosphate synthase/TENI {ECO:0000313|EMBL:EDN84294.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
thiamine phosphate pyrophosphorylase
L3_079_363G1_scaffold_33_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36913..37752)
DNA (840bp) protein (280aa)
Phosphomethylpyrimidine kinase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XE61_9PORP
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CDD14586.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
L3_079_363G1_scaffold_33_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38189..40744
DNA (2556bp) protein (852aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7ALQ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14587.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
Displaying items 1-30 of 109 in total

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