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L3_079_363G1_scaffold_54

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Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_54_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(353..712)
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7V6_9ACTN
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LSU ribosomal protein L20P
L3_079_363G1_scaffold_54_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(759..950)
DNA (192bp) protein (64aa)
50S ribosomal protein L35 n=2 Tax=Collinsella RepID=A4E7V7_9ACTN
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LSU ribosomal protein L35P
L3_079_363G1_scaffold_54_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(983..1552)
DNA (570bp) protein (190aa)
Translation initiation factor IF-3 n=2 Tax=Collinsella RepID=A4E7V8_9ACTN
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
translation initiation factor 3 (bIF-3)
L3_079_363G1_scaffold_54_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2110..3579)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZE09_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75373.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_363G1_scaffold_54_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3894..4760)
DNA (867bp) protein (289aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=2 Tax=Collinsella RepID=A4E7W2_9ACTN
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:KGI75372.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_363G1_scaffold_54_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4955..5644)
DNA (690bp) protein (230aa)
Metallo-beta-lactamase domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7W3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75371.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
beta-lactamase domain-containing protein
L3_079_363G1_scaffold_54_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5727..8087)
DNA (2361bp) protein (787aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBG0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75370.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_363G1_scaffold_54_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8103..11390)
DNA (3288bp) protein (1096aa)
exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7W6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75369.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_363G1_scaffold_54_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11665..12663
DNA (999bp) protein (333aa)
Sodium bile acid symporter family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7W7_9ACTN
Sodium bile acid symporter family protein {ECO:0000313|EMBL:EBA39983.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Predicted Na+-dependent transporter
L3_079_363G1_scaffold_54_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12691..13491)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZP45_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75367.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_363G1_scaffold_54_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13495..14172)
DNA (678bp) protein (226aa)
CutC family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7W9_9ACTN
CutC family protein {ECO:0000313|EMBL:EBA39985.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
copper homeostasis protein
L3_079_363G1_scaffold_54_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14348..15061)
DNA (714bp) protein (238aa)
ABC transporter, ATP-binding protein n=2 Tax=Collinsella RepID=A4E7X0_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA36143.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
amino acid ABC transporter ATP-binding protein
L3_079_363G1_scaffold_54_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15062..15922)
DNA (861bp) protein (287aa)
ABC transporter, ATP-binding protein n=2 Tax=Collinsella RepID=A4E7X1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75364.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
branched-chain amino acid ABC transporter ATP-binding protein
L3_079_363G1_scaffold_54_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15912..16991)
DNA (1080bp) protein (360aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBB8_9ACTN
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CDA36145.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
amino acid ABC transporter permease
L3_079_363G1_scaffold_54_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17001..17882)
DNA (882bp) protein (294aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7X3_9ACTN
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EBA39989.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter permease
L3_079_363G1_scaffold_54_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18022..19209)
DNA (1188bp) protein (396aa)
Receptor family ligand-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7X4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75361.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
amino acid ABC transporter substrate-binding protein
L3_079_363G1_scaffold_54_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19480..20646)
DNA (1167bp) protein (389aa)
Tat pathway signal sequence domain protein n=2 Tax=Collinsella RepID=A4E7X5_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EBA39991.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter substrate-binding protein
L3_079_363G1_scaffold_54_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20897..22240
DNA (1344bp) protein (448aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Homoserine dehydrogenase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7X6_9ACTN
homoserine dehydrogenase
L3_079_363G1_scaffold_54_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22512..24074)
DNA (1563bp) protein (521aa)
Transporter, CPA2 family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7X8_9ACTN
Transporter, CPA2 family {ECO:0000313|EMBL:EBA39994.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_363G1_scaffold_54_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24259..28005
DNA (3747bp) protein (1249aa)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAJ1_9ACTN
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CDA35860.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Phosphoribosylformylglycinamidine synthase
L3_079_363G1_scaffold_54_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28105..29040
DNA (936bp) protein (312aa)
Putative membrane protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Y0_9ACTN
Putative membrane protein {ECO:0000313|EMBL:EBA39996.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L3_079_363G1_scaffold_54_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29231..30232)
DNA (1002bp) protein (334aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Y1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75355.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
diguanylate cyclase
L3_079_363G1_scaffold_54_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30562..31584)
DNA (1023bp) protein (341aa)
Putative 2-keto-3-deoxygluconate transporter n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Y2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75354.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
2-keto-3-deoxygluconate permease
L3_079_363G1_scaffold_54_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31758..32663
DNA (906bp) protein (302aa)
HDIG domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4V2_9ACTN
HDIG domain protein {ECO:0000313|EMBL:CDA36152.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_079_363G1_scaffold_54_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32660..33865)
DNA (1206bp) protein (402aa)
Electron transfer flavoprotein FAD-binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Y6_9ACTN
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EBA40002.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
electron transfer flavoprotein subunit alpha-like protein
L3_079_363G1_scaffold_54_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33866..34681)
DNA (816bp) protein (272aa)
Electron transfer flavoprotein domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHW2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75349.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
electron transfer flavoprotein subunit alpha/beta-like protein
L3_079_363G1_scaffold_54_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34684..36285)
DNA (1602bp) protein (534aa)
D-lactate dehydrogenase (EC:1.1.2.4)
FAD linked oxidase C-terminal domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBC5_9ACTN
FAD linked oxidase C-terminal domain protein {ECO:0000313|EMBL:CDA36155.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_079_363G1_scaffold_54_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36629..36925
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZP57_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75347.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_363G1_scaffold_54_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36922..37431
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Z2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40008.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_079_363G1_scaffold_54_30
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

37522..38121
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8Z4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36158.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Displaying items 1-30 of 102 in total

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