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L3_079_363G1_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_56_1
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..2979)
DNA (2979bp) protein (993aa)
Cell well associated RhsD protein n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8A2V3_BACTN
Cell well associated RhsD protein {ECO:0000313|EMBL:AAO78308.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
cell well associated RhsD protein
L3_079_363G1_scaffold_56_2
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2976..6122)
DNA (3147bp) protein (1049aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q8A2V4_BACTN
Uncharacterized protein {ECO:0000313|EMBL:AAO78307.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
hypothetical protein
L3_079_363G1_scaffold_56_3
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6235..6339)
DNA (105bp) protein (35aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I0PZ91_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIC72794.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L3_079_363G1_scaffold_56_4
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6336..6851)
DNA (516bp) protein (172aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IJD6_9BACE
N-acetylmuramoyl-L-alanine amidase
Uncharacterized protein {ECO:0000313|EMBL:EES69150.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_079_363G1_scaffold_56_5
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6932..7438)
DNA (507bp) protein (169aa)
Putative non-specific DNA-binding protein n=2 Tax=Bacteroides RepID=Q8A2V6_BACTN
non-specific DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:EES69151.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_079_363G1_scaffold_56_6
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7561..8469)
DNA (909bp) protein (303aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q8A2V7_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO78304.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_363G1_scaffold_56_7
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8457..8777)
DNA (321bp) protein (107aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=Q8A2V8_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO78303.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_363G1_scaffold_56_8
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9201..9911
DNA (711bp) protein (237aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6IJE0_9BACE
hypothetical protein
Putative transcriptional regulator {ECO:0000313|EMBL:AAO78302.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_363G1_scaffold_56_9
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10146..11513)
DNA (1368bp) protein (456aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000255|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000255|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000255|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01864}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=2 Tax=Bacteroides RepID=MIAB_BACTN
(dimethylallyl)adenosine tRNA methylthiotransferase
L3_079_363G1_scaffold_56_10
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11732..12226)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8A2W1_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO78300.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_363G1_scaffold_56_11
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12262..13761
DNA (1500bp) protein (500aa)
Acetyl-CoA hydrolase/transferase family protein n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IH74_9BACE
Acetyl-CoA hydrolase/transferase family protein {ECO:0000313|EMBL:EFI02995.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
coenzyme A transferase
L3_079_363G1_scaffold_56_12
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13765..14514
DNA (750bp) protein (250aa)
TonB n=2 Tax=Bacteroides RepID=Q8A2W3_BACTN
TonB
TonB {ECO:0000313|EMBL:AAO78298.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_363G1_scaffold_56_13
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14539..15177)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q8A2W4_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO78297.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_363G1_scaffold_56_14
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15184..15774)
DNA (591bp) protein (197aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Bacteroides RepID=C6IJE6_9BACE
RNA polymerase ECF-type sigma factor
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:AAO78296.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_363G1_scaffold_56_15
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15771..17063)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q8A2W6_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO78295.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_363G1_scaffold_56_16
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17084..18265)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q8A2W7_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO78294.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_363G1_scaffold_56_17
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18414..19820)
DNA (1407bp) protein (469aa)
Penicillin-binding protein, D-alanyl-D-alanine carboxypeptidase n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8A2W8_BACTN
penicillin-binding protein D-alanyl-D-alanine carboxypeptidase
Penicillin-binding protein, D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:AAO78293.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_363G1_scaffold_56_18
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19900..21243)
DNA (1344bp) protein (448aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IH67_9BACE
dihydrolipoamide dehydrogenase
L3_079_363G1_scaffold_56_19
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21255..21650)
DNA (396bp) protein (132aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=Q8A2X0_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO78291.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_363G1_scaffold_56_20
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21758..23329
DNA (1572bp) protein (524aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
L-aspartate oxidase n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IH65_9BACE
L-aspartate oxidase
L3_079_363G1_scaffold_56_21
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23332..23604
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IH64_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI02985.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
hypothetical protein
L3_079_363G1_scaffold_56_22
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23678..24256)
DNA (579bp) protein (193aa)
Rubrerythrin n=5 Tax=Bacteroides RepID=Q8A2X3_BACTN
rubrerythrin
Uncharacterized protein {ECO:0000313|EMBL:EES69169.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_079_363G1_scaffold_56_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24359..24514
DNA (156bp) protein (52aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZES6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73534.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_079_363G1_scaffold_56_24
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24501..26180
DNA (1680bp) protein (560aa)
Sulfate permease family protein n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KSE9_9BACE
Sulfate permease family protein {ECO:0000313|EMBL:CDE79339.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
sulfate transporter, permease
L3_079_363G1_scaffold_56_25
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26274..27404)
DNA (1131bp) protein (377aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IH61_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI02982.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
hypothetical protein
L3_079_363G1_scaffold_56_26
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27676..29109
DNA (1434bp) protein (478aa)
Sialic acid-specific 9-O-acetylesterase n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KWL6_9BACE
Sialic acid-specific 9-O-acetylesterase {ECO:0000313|EMBL:CDE79342.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
sialic acid-specific 9-O-acetylesterase
L3_079_363G1_scaffold_56_27
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29934..30230
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IH59_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI02980.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
hypothetical protein
L3_079_363G1_scaffold_56_28
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30155..30394)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Bacteroides faecis CAG:32 RepID=R6VBF3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC89386.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides faecis CAG:32.;"
L3_079_363G1_scaffold_56_29
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30435..34319)
DNA (3885bp) protein (1295aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9H7B8_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOR99655.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
alpha-xylosidase
L3_079_363G1_scaffold_56_30
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34548..35321)
DNA (774bp) protein (258aa)
Fe-S oxidoreductase n=3 Tax=Bacteroides RepID=D7IH56_9BACE
Fe-S oxidoreductase
Fe-S oxidoreductase {ECO:0000313|EMBL:EFI02977.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
Displaying items 1-30 of 108 in total

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