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L3_079_363G1_scaffold_78

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_78_1
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(729..1211)
DNA (483bp) protein (161aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=E1WN09_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEZ23939.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_079_363G1_scaffold_78_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1519..2085
DNA (567bp) protein (189aa)
RNA polymerase ECF-type sigma factor n=8 Tax=Bacteroides RepID=Q64P71_BACFR
putative RNA polymerase sigma factor
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CAH09425.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
L3_079_363G1_scaffold_78_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2158..3126
DNA (969bp) protein (323aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=C6ICY9_9BACE
hypothetical protein
Putative anti-sigma factor {ECO:0000313|EMBL:BAD50712.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_363G1_scaffold_78_4
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3313..6753
DNA (3441bp) protein (1147aa)
SusC/RagA family TonB-linked outer membrane protein n=9 Tax=Bacteroides RepID=C6ICZ0_9BACE
hypothetical protein
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:CDD40830.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_363G1_scaffold_78_5
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6776..8395
DNA (1620bp) protein (540aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=I3HL03_BACFG
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:CDD40832.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
putative liporotein
L3_079_363G1_scaffold_78_6
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8433..8807
DNA (375bp) protein (125aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=C6ICZ2_9BACE
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CDD40833.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_363G1_scaffold_78_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8815..10851
DNA (2037bp) protein (679aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=I8XTU1_BACFG
Endonuclease/Exonuclease/phosphatase family protein {ECO:0000313|EMBL:EXZ26814.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
hypothetical protein
L3_079_363G1_scaffold_78_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10947..12575)
DNA (1629bp) protein (543aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LWH8_9BACE
BlaR1 peptidase M56 family protein {ECO:0000313|EMBL:EYE42040.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
hypothetical protein
L3_079_363G1_scaffold_78_9
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12572..13066)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1G975_BACFG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD40836.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_363G1_scaffold_78_10
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13070..13444)
DNA (375bp) protein (125aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=C6ICZ5_9BACE
putative antibiotic resistance-related regulatory protein
Putative transcriptional regulator {ECO:0000313|EMBL:CDD40838.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_363G1_scaffold_78_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13659..16946)
DNA (3288bp) protein (1096aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=K1FKR8_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA79801.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
putative Tricorn-like protease
L3_079_363G1_scaffold_78_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17053..17994)
DNA (942bp) protein (314aa)
mdh; putative malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
Malate dehydrogenase n=18 Tax=Bacteroides RepID=MDH_BACFN
L3_079_363G1_scaffold_78_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18181..19053
DNA (873bp) protein (291aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=Q64P61_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYB07866.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_079_363G1_scaffold_78_14
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19176..20117)
DNA (942bp) protein (314aa)
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Bacteroides RepID=D1JWD2_9BACE
hypothetical protein
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EEZ23951.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_079_363G1_scaffold_78_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20098..20652)
DNA (555bp) protein (185aa)
RNA polymerase ECF-type sigma factor n=11 Tax=Bacteroides RepID=Q64P59_BACFR
putative RNA polymerase sigma factor
RNA polymerase sigma-70 factor, expansion 1 family protein {ECO:0000313|EMBL:EXZ52113.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_079_363G1_scaffold_78_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20692..23259)
DNA (2568bp) protein (856aa)
Putative exported protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5L8Z4_BACFN
Putative exported protein {ECO:0000313|EMBL:CAH09438.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
hypothetical protein
L3_079_363G1_scaffold_78_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23841..25295
DNA (1455bp) protein (485aa)
Putative outer membrane protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WNA6_BACF6
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:CBW24282.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_363G1_scaffold_78_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25373..26365
DNA (993bp) protein (331aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=Q64P55_BACFR
hypothetical protein
HlyD secretion family protein {ECO:0000313|EMBL:EYA17428.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
L3_079_363G1_scaffold_78_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26362..27543
DNA (1182bp) protein (394aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=Q64P54_BACFR
putative conserved transport-related membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EKA86110.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_079_363G1_scaffold_78_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27543..28793
DNA (1251bp) protein (417aa)
Putative transport-related membrane protein n=1 Tax=Bacteroides fragilis CAG:47 RepID=R7ADU7_9BACE
ABC-2 type transporter family protein {ECO:0000313|EMBL:EXZ71581.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
putative transport-related membrane protein
L3_079_363G1_scaffold_78_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28970..30919
DNA (1950bp) protein (650aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6ID07_9BACE
Glycoside hydrolase 97 family protein {ECO:0000313|EMBL:EXY72828.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
hypothetical protein
L3_079_363G1_scaffold_78_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31069..31749
DNA (681bp) protein (227aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q64P51_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE42053.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_079_363G1_scaffold_78_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31770..32519
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q64P50_BACFR
hypothetical protein
GDSL-like Lipase/Acylhydrolase family protein {ECO:0000313|EMBL:EXY68621.1}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
L3_079_363G1_scaffold_78_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32720..34780
DNA (2061bp) protein (687aa)
TonB family domain-containing protein n=3 Tax=Bacteroides RepID=C6ID11_9BACE
TonB family domain-containing protein {ECO:0000313|EMBL:EIY41570.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
hypothetical protein
L3_079_363G1_scaffold_78_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34823..36724
DNA (1902bp) protein (634aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6ID12_9BACE
AhpC/TSA family protein {ECO:0000313|EMBL:EXY68603.1}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
putative exported thioredoxin
L3_079_363G1_scaffold_78_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36815..37921)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=E1WNB6_BACF6
hypothetical protein
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EYE42059.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_079_363G1_scaffold_78_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37930..38688)
DNA (759bp) protein (253aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
tRNA (guanine-N(7)-)-methyltransferase n=13 Tax=Bacteroides RepID=TRMB_BACFR
putative methyltransferase
L3_079_363G1_scaffold_78_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38698..39504)
DNA (807bp) protein (269aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=C6ID15_9BACE
putative hydrolase
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:EXZ81532.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
L3_079_363G1_scaffold_78_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39516..40535)
DNA (1020bp) protein (340aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EYE43834.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EYE43834.1};; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
Branched-chain amino acid aminotransferase n=13 Tax=Bacteroides RepID=Q64P43_BACFR
putative branched-chain amino acid aminotransferase
L3_079_363G1_scaffold_78_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40581..40793)
DNA (213bp) protein (71aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00198686};; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
Uncharacterized protein n=14 Tax=Bacteroides RepID=Q64P42_BACFR
putative exodeoxyribonuclease VII small subunit
Displaying items 1-30 of 118 in total

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