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L3_079_363G1_scaffold_84

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Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_363G1_scaffold_84_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..298
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JY31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17232.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_079_363G1_scaffold_84_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

310..1131
DNA (822bp) protein (274aa)
Transcriptional regulator, AraC family n=2 Tax=Lachnospiraceae RepID=A7AZW1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47235.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
AraC-type DNA-binding domain-containing proteins
L3_079_363G1_scaffold_84_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1264..1878
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JY29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47234.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_079_363G1_scaffold_84_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1912..3399
DNA (1488bp) protein (496aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JY28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47233.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L-fucose isomerase and related proteins
L3_079_363G1_scaffold_84_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3415..4872
DNA (1458bp) protein (486aa)
xylulokinase (EC:2.7.1.17)
Xylulokinase n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JY27_9FIRM
Xylulokinase {ECO:0000313|EMBL:EGN47232.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_079_363G1_scaffold_84_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5043..7073)
DNA (2031bp) protein (677aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JY26_9FIRM
L3_079_363G1_scaffold_84_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7267..8541
DNA (1275bp) protein (425aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JY25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47230.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
sucrose-6-phosphate hydrolase
L3_079_363G1_scaffold_84_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8975..9355)
DNA (381bp) protein (127aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Aspartate 1-decarboxylase n=13 Tax=Bacteria RepID=C8WPL2_EGGLE
aspartate alpha-decarboxylase
L3_079_363G1_scaffold_84_9
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9369..10214)
DNA (846bp) protein (282aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000313|EMBL:CBK89197.1}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000313|EMBL:CBK89197.1};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
Pantothenate synthetase n=14 Tax=root RepID=C8WPL3_EGGLE
pantoate--beta-alanine ligase
L3_079_363G1_scaffold_84_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10226..11053)
DNA (828bp) protein (276aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=3 Tax=Clostridiales RepID=F7JY22_9FIRM
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase
L3_079_363G1_scaffold_84_11
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11028..11984)
DNA (957bp) protein (319aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TV83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK23946.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L3_079_363G1_scaffold_84_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12411..12707
DNA (297bp) protein (99aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TNF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67205.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_079_363G1_scaffold_84_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13076..13348
DNA (273bp) protein (91aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5U7S6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67206.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_079_363G1_scaffold_84_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13412..13501
DNA (90bp) protein (30aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JY18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47223.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_079_363G1_scaffold_84_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13498..14304
DNA (807bp) protein (269aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TN65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67208.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
N-acetylmuramoyl-L-alanine amidase
L3_079_363G1_scaffold_84_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14940..15833
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B056_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78522.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_079_363G1_scaffold_84_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15830..17146
DNA (1317bp) protein (439aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TNG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17248.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_079_363G1_scaffold_84_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17228..17932
DNA (705bp) protein (235aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5U7T1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67211.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_079_363G1_scaffold_84_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17942..20509
DNA (2568bp) protein (856aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JY13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47218.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type antimicrobial peptide transport system, permease component
L3_079_363G1_scaffold_84_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20615..21292
DNA (678bp) protein (226aa)
Response regulator receiver domain protein n=2 Tax=Lachnospiraceae RepID=A7B060_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47217.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_079_363G1_scaffold_84_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21292..22776
DNA (1485bp) protein (495aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=4 Tax=Clostridiales RepID=A7B061_RUMGN
Signal transduction histidine kinase
L3_079_363G1_scaffold_84_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22875..23480
DNA (606bp) protein (202aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=4 Tax=Clostridiales RepID=A7B062_RUMGN
L3_079_363G1_scaffold_84_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23494..24258
DNA (765bp) protein (255aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
imidazoleglycerol phosphate synthase, cyclase subunit (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=3 Tax=Clostridiales RepID=A7B063_RUMGN
L3_079_363G1_scaffold_84_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24283..24951
DNA (669bp) protein (223aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=3 Tax=Clostridiales RepID=A7B064_RUMGN
L3_079_363G1_scaffold_84_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25145..25876
DNA (732bp) protein (244aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=4 Tax=Clostridiales RepID=A7B065_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47212.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_079_363G1_scaffold_84_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25873..27390
DNA (1518bp) protein (506aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TV98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17257.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_079_363G1_scaffold_84_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27359..28777
DNA (1419bp) protein (473aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TNH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67220.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC-type antimicrobial peptide transport system, permease component
L3_079_363G1_scaffold_84_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28981..29244
DNA (264bp) protein (88aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B068_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47209.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_079_363G1_scaffold_84_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29248..30297
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B069_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78535.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_079_363G1_scaffold_84_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30313..30933)
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BRZ5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47207.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Displaying items 1-30 of 109 in total

View Taxonomy